RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NEK3P51956 506 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 METAP1P53582 386 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 ITKQ08881 620 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 HNRNPDQ14103 355 aaKnown RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 PDK1Q15118 436 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 LLGL1Q15334 1064 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 PPP2R5EQ16537 467 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 CCDC181Q5TID7 509 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 KIAA0895LQ68EN5 471 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 NCEH1Q6PIU2 408 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 ZNF662Q6ZS27 426 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 RABEPKQ7Z6M1 372 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 HDAC11Q96DB2 347 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 TSGA13Q96PP4 275 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 ALS2CR12Q96Q35 445 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 PSKH2Q96QS6 385 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 TUBGCP5Q96RT8 1024 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 MIR1-1HGQ9H1L0 117 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 C6orf106Q9H6K1 298 aaPredicted RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 VPS45Q9NRW7 570 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 DTLQ9NZJ0 730 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 SUSD2Q9UGT4 822 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 TPX2Q9ULW0 747 aaKnown RBP15.41■□□□□ 0.06
LITAF-217ENST00000575426 PPP2R2CQ9Y2T4 447 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 ADAMTS9Q9P2N4 1935 aa15.41■□□□□ 0.06
LITAF-217ENST00000575426 FAM186AA6NE01 2351 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 hCG_1818297A0A087WSY0 165 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 PLRG1O43660 514 aaKnown RBP15.4■□□□□ 0.06
LITAF-217ENST00000575426 FOXD2O60548 495 aaPredicted RBP15.4■□□□□ 0.06
LITAF-217ENST00000575426 TGM2P21980 687 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 HOXD12P35452 270 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 MAPK8P45983 427 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 ADPRHP54922 357 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 CCDC6Q16204 474 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 TAZQ16635 292 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 AGBL4Q5VU57 503 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 NPNTQ6UXI9 565 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 C12orf50Q8NA57 414 aaPredicted RBP15.4■□□□□ 0.06
LITAF-217ENST00000575426 CEP76Q8TAP6 659 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 P3H4Q92791 437 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 HEMGNQ9BXL5 484 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 SUV39H2Q9H5I1 410 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 ATP13A3Q9H7F0 1226 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 PREBQ9HCU5 417 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 NT5MQ9NPB1 228 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 SEMA4GQ9NTN9 838 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 PILRBQ9UKJ0 227 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 CAPN6Q9Y6Q1 641 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 OTOGLQ3ZCN5 2332 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 ATXN2Q99700 1313 aaKnown RBP15.4■□□□□ 0.06
LITAF-217ENST00000575426 PLXNA2O75051 1894 aa15.4■□□□□ 0.06
LITAF-217ENST00000575426 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 C16orf96A6NNT2 1141 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 KHNYNO15037 678 aaKnown RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 INSIG1O15503 277 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PCDH8O95206 1070 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PEX11BO96011 259 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 ZNF806P0C7X5 589 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 ADRB3P13945 408 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 CCNB1P14635 433 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 MAOBP27338 520 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 SERPINA4P29622 427 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PEX5P50542 639 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 CCR5P51681 352 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 AP1S1P61966 158 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 BCL2L1Q07817 233 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 AP1B1Q10567 949 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 CSRP2Q16527 193 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 RALGPS1Q5JS13 557 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PIP5KL1Q5T9C9 394 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 TTC7BQ86TV6 843 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 HCAR2Q8TDS4 363 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 DNASE2BQ8WZ79 361 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 FATE1Q969F0 183 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 RAB7BQ96AH8 199 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 BIRC7Q96CA5 298 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 PDLIM2Q96JY6 352 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 ZNF641Q96N77 438 aaPredicted RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 NUSAP1Q9BXS6 441 aaKnown RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 OSBPL8Q9BZF1 889 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 RBM22Q9NW64 420 aaKnown RBP eCLIP15.39■□□□□ 0.05
LITAF-217ENST00000575426 AMACRQ9UHK6 382 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 EIF2B4Q9UI10 523 aaKnown RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 PACSIN2Q9UNF0 486 aaPredicted RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 EFR3BQ9Y2G0 817 aa15.39■□□□□ 0.05
LITAF-217ENST00000575426 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.39■□□□□ 0.05
LITAF-217ENST00000575426 PRR5-ARHGAP8B1AHC4 643 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 RNF103O00237 685 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 NEMP1O14524 444 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 TJP3O95049 919 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 PIGNO95427 931 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 CES1P23141 567 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms