RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TNRC6BQ9UPQ9 1833 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 MTSS1O43312 755 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 GFRA3O60609 400 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 LRP3O75074 770 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZNF189O75820 626 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 UGT2B4P06133 528 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 CCNB1P14635 433 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 XPAP23025 273 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 NFKBIAP25963 317 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 SERPINA4P29622 427 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 ACSL1P33121 698 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 DRD3P35462 400 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 CREB5Q02930 508 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 BCL2L1Q07817 233 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 ITKQ08881 620 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 RPS6KA1Q15418 735 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 BBS12Q6ZW61 710 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 RABEPKQ7Z6M1 372 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 RGL4Q8IZJ4 473 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 GPR161Q8N6U8 529 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 TFB1MQ8WVM0 346 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 ALG3Q92685 438 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 RAB7BQ96AH8 199 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 HSPA12BQ96MM6 686 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 OLFM3Q96PB7 478 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 HEMGNQ9BXL5 484 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 KCNF1Q9H3M0 494 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 DKK3Q9UBP4 350 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 SUSD2Q9UGT4 822 aa12.93□□□□□ -0.34
TRAPPC1-206ENST00000573989 PI4KAP42356 2102 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 MYO15AQ9UKN7 3530 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 A0A1W2PQ67 120 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 C16orf96A6NNT2 1141 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 HACD1B0YJ81 288 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 DDX3YO15523 660 aaKnown RBP12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 PLRG1O43660 514 aaKnown RBP12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 FOXD2O60548 495 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 PEX11BO96011 259 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 PYGMP11217 842 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 GNSP15586 552 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 HOXD12P35452 270 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 SUOXP51687 545 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 ADPRHP54922 357 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 XRCC4Q13426 336 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 LLGL1Q15334 1064 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 AGBL4Q5VU57 503 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 BRAT1Q6PJG6 821 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 NPNTQ6UXI9 565 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 ARMCX6Q7L4S7 300 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 SYT12Q8IV01 421 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 TEX26Q8N6G2 289 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 SNX19Q92543 992 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 MAML1Q92585 1016 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 FAM131CQ96AQ9 280 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 ARRDC3Q96B67 414 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 KLHL32Q96NJ5 620 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 LGMNQ99538 433 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 SUV39H2Q9H5I1 410 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
TRAPPC1-206ENST00000573989 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 NEMP1O14524 444 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 INSIG1O15503 277 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 KIF5CO60282 957 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 SOCS5O75159 536 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 FSBPO95073 299 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 ADRB3P13945 408 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 CA4P22748 312 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 GKP32189 559 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 NUDT1P36639 197 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 MPLP40238 635 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms