RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZDHHC6Q9H6R6 413 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 LZTFL1Q9NQ48 299 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 DTLQ9NZJ0 730 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 AMACRQ9UHK6 382 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
CHD3-216ENST00000573936 HEY1Q9Y5J3 304 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
CHD3-216ENST00000573936 CHD5Q8TDI0 1954 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 hCG_1818297A0A087WSY0 165 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 LRRC72A6NJI9 287 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 KPNA3O00505 521 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 KRIT1O00522 736 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 CST8O60676 142 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 EPN2O95208 641 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 SEMA4FO95754 770 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 FTCDO95954 541 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 CTSLP07711 333 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 PTPN7P35236 360 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 MAPK8P45983 427 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 GBE1Q04446 702 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 SLC10A2Q12908 348 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 ZNF235Q14590 738 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 RALGPS1Q5JS13 557 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 GDPD4Q6W3E5 623 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 FAM124AQ86V42 546 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 TMEFF1Q8IYR6 380 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 AADATQ8N5Z0 425 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 TRIM58Q8NG06 486 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 HCAR2Q8TDS4 363 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 MAML1Q92585 1016 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 P3H4Q92791 437 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 TRIM44Q96DX7 344 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 ZNF419Q96HQ0 510 aaPredicted RBP11.18□□□□□ -0.62
CHD3-216ENST00000573936 HES6Q96HZ4 224 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 PSKH2Q96QS6 385 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 TUBGCP5Q96RT8 1024 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 HDAC8Q9BY41 377 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 SMOC1Q9H4F8 434 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 SARDHQ9UL12 918 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
CHD3-216ENST00000573936 WDFY3Q8IZQ1 3526 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 METTL12A8MUP2 240 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 TJP3O95049 919 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 PEX11BO96011 259 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 KRT10P13645 584 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 CES1P23141 567 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ITGB7P26010 798 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 PMLP29590 882 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ACSL1P33121 698 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 DRD3P35462 400 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 MMP13P45452 471 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 NEK3P51956 506 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 AP1S1P61966 158 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 DYNLT1P63172 113 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 SHC2P98077 582 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 PPIDQ08752 370 aaKnown RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 SLC10A7Q0GE19 358 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ZNF805Q5CZA5 627 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 WDR45BQ5MNZ6 344 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 LYSMD4Q5XG99 296 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ERN2Q76MJ5 926 aaKnown RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 SRLQ86TD4 932 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 TEX26Q8N6G2 289 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 OR2T34Q8NGX1 318 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 OR14C36Q8NHC7 312 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 GRIN3AQ8TCU5 1115 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 FAM131CQ96AQ9 280 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ARRDC3Q96B67 414 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 ZNF641Q96N77 438 aaPredicted RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 OSBPL8Q9BZF1 889 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 CD93Q9NPY3 652 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 RXFP3Q9NSD7 469 aa11.17□□□□□ -0.62
CHD3-216ENST00000573936 EVLQ9UI08 416 aaPredicted RBP11.17□□□□□ -0.62
CHD3-216ENST00000573936 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.16□□□□□ -0.62
CHD3-216ENST00000573936 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 BCLAF3A2AJT9 711 aaKnown RBP11.16□□□□□ -0.62
CHD3-216ENST00000573936 GOLGA6L9A6NEM1 432 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 MEI4A8MW99 385 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 APOC4-APOC2K7ER74 178 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 DDX3YO15523 660 aaKnown RBP11.16□□□□□ -0.62
CHD3-216ENST00000573936 MTSS1O43312 755 aa11.16□□□□□ -0.62
CHD3-216ENST00000573936 PLRG1O43660 514 aaKnown RBP11.16□□□□□ -0.62
CHD3-216ENST00000573936 ZNF189O75820 626 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms