RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PRPF39Q86UA1 669 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 RYBPQ8N488 228 aaPredicted RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ARRDC3Q96B67 414 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 SKA1Q96BD8 255 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 SERAC1Q96JX3 654 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 SLC6A18Q96N87 628 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 NCAPGQ9BPX3 1015 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 HEPHQ9BQS7 1158 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ORAI3Q9BRQ5 295 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 SNRNP25Q9BV90 132 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 TM6SF2Q9BZW4 377 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 DEF6Q9H4E7 631 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 DHX35Q9H5Z1 703 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 ZDHHC6Q9H6R6 413 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 IL21RQ9HBE5 538 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PREBQ9HCU5 417 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 GPATCH2LQ9NWQ4 482 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 DONSONQ9NYP3 566 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ANKRD6Q9Y2G4 727 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 SNX11Q9Y5W9 270 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PCNX2A6NKB5 2137 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 WASH4PA8MWX3 477 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 RASA4BC9J798 803 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 EEF2KO00418 725 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 VILLO15195 856 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 FANCGO15287 622 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 DAPK3O43293 454 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 RASA4O43374 803 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 LATO43561 262 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 KDELR3O43731 214 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 SH3BP5O60239 455 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 ZNF821O75541 412 aaPredicted RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 GJB3O75712 270 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 CD160O95971 181 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 ZNF883P0CG24 379 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 CD46P15529 392 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 CD38P28907 300 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 MIPP30301 263 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 NUDT1P36639 197 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 SNRPD1P62314 119 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 CA9Q16790 459 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 PARP15Q460N3 678 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 SLC45A4Q5BKX6 768 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 ZNF569Q5MCW4 686 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 PIP5KL1Q5T9C9 394 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 ERN2Q76MJ5 926 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 MTERF4Q7Z6M4 381 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 KIAA1328Q86T90 577 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 TRIM69Q86WT6 500 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 NAXDQ8IW45 347 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 ARFGAP1Q8N6T3 406 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 SETD7Q8WTS6 366 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 HMCESQ96FZ2 354 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 PEBP4Q96S96 227 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 NAPGQ99747 312 aaPredicted RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 HDAC8Q9BY41 377 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 THAP2Q9H0W7 228 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 NOL6Q9H6R4 1146 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 TM7SF3Q9NS93 570 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 HECAQ9UBI9 543 aaPredicted RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 CDC23Q9UJX2 597 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 NENFQ9UMX5 172 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 FNDC3AQ9Y2H6 1198 aaKnown RBP9.23□□□□□ -0.93
NDE1-207ENST00000573203 PCDHB9Q9Y5E1 797 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 MRFAP1Q9Y605 127 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 KNL1Q8NG31 2342 aa9.23□□□□□ -0.93
NDE1-207ENST00000573203 A0A087X0T9 212 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 A0A0A6YYK5 440 aaPredicted RBP9.22□□□□□ -0.93
NDE1-207ENST00000573203 SPAARA0A1B0GVQ0 90 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 EFCAB8A8MWE9 144 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 C10orf142B7Z368 130 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 RNF103O00237 685 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 KRIT1O00522 736 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 KCNK3O14649 394 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 DFNA5O60443 496 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 RNGTTO60942 597 aaKnown RBP9.22□□□□□ -0.93
NDE1-207ENST00000573203 LRCH4O75427 683 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 URI1O94763 535 aaPredicted RBP9.22□□□□□ -0.93
NDE1-207ENST00000573203 TMCC1O94876 653 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 PCDH8O95206 1070 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 GSRP00390 522 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 FAM228BP0C875 321 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 ITGB7P26010 798 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 PMLP29590 882 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 CTSKP43235 329 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 NEK3P51956 506 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 NDST2P52849 883 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 TAS2R38P59533 333 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 RHOAP61586 193 aa9.22□□□□□ -0.93
NDE1-207ENST00000573203 SIM1P81133 766 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms