RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CRYL1Q9Y2S2 319 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 A0A0G2JND7 137 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 C2orf71A6NGG8 1288 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ALDH1A2O94788 518 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ELFN1P0C7U0 828 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 NCF2P19878 526 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 IGFBP6P24592 240 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 ACVRL1P37023 503 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 PSMD8P48556 350 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 OCRLQ01968 901 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 BOP1Q14137 746 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 TRADDQ15628 312 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 MMEL1Q495T6 779 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 C1orf53Q5VUE5 145 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ZNF366Q8N895 744 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 TRIM55Q9BYV6 548 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 MIR1-1HGQ9H1L0 117 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 FBXO10Q9UK96 956 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ACOT9Q9Y305 439 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 RIPK2O43353 540 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 NDST3O95803 873 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 PTPN3P26045 913 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 HOXC8P31273 242 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 GLRBP48167 497 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 RCN2Q14257 317 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 CNGA3Q16281 694 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 AAK1Q2M2I8 961 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ICE2Q659A1 982 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 RAET1GQ6H3X3 334 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 POTEHQ6S545 545 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 MARK2Q7KZI7 788 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 SPATS2Q86XZ4 545 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 TRAPPC5Q8IUR0 188 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 CCDC197Q8NCU1 140 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 SKA1Q96BD8 255 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 OTUB2Q96DC9 234 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 HEPHQ9BQS7 1158 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ZNFX1Q9P2E3 1918 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 PTPRZ1P23471 2315 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 INSIG1O15503 277 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 BANF1O75531 89 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ASLP04424 464 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 MYL2P10916 166 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ABCG1P45844 678 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 GPR1P46091 355 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 SERPINB8P50452 374 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 AP1S1P61966 158 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ACTN3Q08043 901 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 RBBP7Q16576 425 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ITPRIPL2Q3MIP1 535 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 TCEAL5Q5H9L2 206 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 CERCAMQ5T4B2 595 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 NCBP2-AS2Q69YL0 99 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 PM20D1Q6GTS8 502 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 TTC27Q6P3X3 843 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 TRMT11Q7Z4G4 463 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 ZFYVE19Q96K21 471 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 TEKT5Q96M29 485 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 TMEM120BA0PK00 339 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 C5orf60A6NFR6 353 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 TMCC1O94876 653 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 TIE1P35590 1138 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 ALFQ53S48 1182 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 HABP4Q5JVS0 413 aaKnown RBP10.21□□□□□ -0.77
SMG6-213ENST00000573166 RHBDF2Q6PJF5 856 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 SCD5Q86SK9 330 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 MYO1HQ8N1T3 1032 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 CYB5D2Q8WUJ1 264 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 TMEM159Q96B96 161 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
SMG6-213ENST00000573166 ZBP1Q9H171 429 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 GBA3Q9H227 469 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 AASDHPPTQ9NRN7 309 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 CATSPERZQ9NTU4 200 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 UTP6Q9NYH9 597 aaKnown RBP10.21□□□□□ -0.77
SMG6-213ENST00000573166 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 GGA2Q9UJY4 613 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 APPL1Q9UKG1 709 aa10.21□□□□□ -0.77
SMG6-213ENST00000573166 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.78
SMG6-213ENST00000573166 SLC10A7Q0GE19 358 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 KBTBD12Q3ZCT8 623 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 PAQR9Q6ZVX9 377 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 PHACTR4Q8IZ21 702 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 PPFIBP2Q8ND30 876 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 HDAC10Q969S8 669 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 MTBPQ96DY7 904 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 CHMP6Q96FZ7 201 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 EBNA1BP2Q99848 306 aaKnown RBP10.21□□□□□ -0.78
SMG6-213ENST00000573166 CWH43Q9H720 699 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 TAS2R13Q9NYV9 303 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 IRS1P35568 1242 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 NKX3-2P78367 333 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 CSHL1Q14406 222 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 CCDC157Q569K6 752 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 KIAA0319Q5VV43 1072 aa10.21□□□□□ -0.78
SMG6-213ENST00000573166 ARMC2Q8NEN0 867 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 306.4 ms