RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SLC39A8Q9C0K1 460 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 CATSPERBQ9H7T0 1116 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 MRPL47Q9HD33 250 aaKnown RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 DONSONQ9NYP3 566 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 ZMIZ1Q9ULJ6 1067 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 HPCAL4Q9UM19 191 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 LUC7L2Q9Y383 392 aaKnown RBP17.57■□□□□ 0.4
SMG6-212ENST00000573153 MFHAS1Q9Y4C4 1052 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 TRPM6Q9BX84 2022 aa17.57■□□□□ 0.4
SMG6-212ENST00000573153 J3KR12 359 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 BUB1O43683 1085 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 UGT2B4P06133 528 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 TPM3P06753 285 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 HNRNPA2B1P22626 353 aaKnown RBP17.56■□□□□ 0.4
SMG6-212ENST00000573153 PCK1P35558 622 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 RGRP47804 291 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 DNA2P51530 1060 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 ZNF135P52742 658 aaPredicted RBP17.56■□□□□ 0.4
SMG6-212ENST00000573153 CAMK2BQ13554 666 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 DPYSQ14117 519 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
SMG6-212ENST00000573153 ZNF805Q5CZA5 627 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 ERMARDQ5T6L9 678 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 TXNRD3NBQ6F5E7 133 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 ZSWIM9Q86XI8 627 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 XPO4Q9C0E2 1151 aaKnown RBP17.56■□□□□ 0.4
SMG6-212ENST00000573153 PCSK1NQ9UHG2 260 aa17.56■□□□□ 0.4
SMG6-212ENST00000573153 APOBEC2Q9Y235 224 aaKnown RBP17.56■□□□□ 0.4
SMG6-212ENST00000573153 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMG6-212ENST00000573153 TSPAN11A1L157 253 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 POM121BA6NF01 834 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 YKT6O15498 198 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 PRAMEF11O60813 436 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 RNF8O76064 485 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 THEGLP0DJG4 465 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 ERCC2P18074 760 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 ITIH2P19823 946 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 ACADVLP49748 655 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 NDST2P52849 883 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 TPI1P60174 286 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 SNRPD1P62314 119 aaKnown RBP17.55■□□□□ 0.4
SMG6-212ENST00000573153 KIAA1161Q6NSJ0 714 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 ARHGAP36Q6ZRI8 547 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 RFX8Q6ZV50 586 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 SLC25A45Q8N413 288 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 SKA1Q96BD8 255 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 ARHGEF26Q96DR7 871 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 CELF6Q96J87 481 aaKnown RBP17.55■□□□□ 0.4
SMG6-212ENST00000573153 KLHL32Q96NJ5 620 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 DHX35Q9H5Z1 703 aaKnown RBP17.55■□□□□ 0.4
SMG6-212ENST00000573153 DYRK4Q9NR20 520 aa17.55■□□□□ 0.4
SMG6-212ENST00000573153 CWC15Q9P013 229 aaKnown RBP17.55■□□□□ 0.4
SMG6-212ENST00000573153 PNMA8BQ9ULN7 279 aaPredicted RBP17.55■□□□□ 0.4
SMG6-212ENST00000573153 A0A087X0T9 212 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 KRIT1O00522 736 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 MUSKO15146 869 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 SDC3O75056 442 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 PCDH8O95206 1070 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 POP4O95707 220 aaKnown RBP17.54■□□□□ 0.4
SMG6-212ENST00000573153 PEX11BO96011 259 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 FAM228BP0C875 321 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 HCAR3P49019 387 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 CLDN6P56747 220 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 DNAJC3Q13217 504 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 STAT4Q14765 748 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 SMAD1Q15797 465 aaKnown RBP17.54■□□□□ 0.4
SMG6-212ENST00000573153 PROX2Q3B8N5 592 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 LRRC73Q5JTD7 316 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 KYAT3Q6YP21 454 aaKnown RBP17.54■□□□□ 0.4
SMG6-212ENST00000573153 CPNE8Q86YQ8 564 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 OXR1Q8N573 874 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 EID2Q8N6I1 236 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 NIPA2Q8N8Q9 360 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 ASB12Q8WXK4 309 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 KLHDC7BQ96G42 594 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 EXOC2Q96KP1 924 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 SLC17A9Q9BYT1 436 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 THAP2Q9H0W7 228 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 ETNK2Q9NVF9 386 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 UCKL1Q9NWZ5 548 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 DKK3Q9UBP4 350 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 LRRK1Q38SD2 2015 aa17.54■□□□□ 0.4
SMG6-212ENST00000573153 COL27A1Q8IZC6 1860 aaPredicted RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 TMEM8BA6NDV4 472 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 IGLON5A6NGN9 336 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 EEF2KO00418 725 aaKnown RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 TRIM38O00635 465 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 ENC1O14682 589 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 CBFA2T2O43439 604 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 PRPSAP2O60256 369 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 BUB1BO60566 1050 aaPredicted RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 PIGNO95427 931 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 PAK4O96013 591 aaPredicted RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 CYP1A2P05177 515 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 ITGAVP06756 1048 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 TIMP2P16035 220 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms