RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 GUCA1BQ9UMX6 200 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 HEY1Q9Y5J3 304 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 PLXNA2O75051 1894 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 BPTFQ12830 3046 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 MEI4A8MW99 385 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 INSIG1O15503 277 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 KRT86O43790 486 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 UGT2B4P06133 528 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 PROS1P07225 676 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 RETP07949 1114 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 ITPKAP23677 461 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 CTNNA2P26232 953 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 MPLP40238 635 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 ZNF33AQ06730 810 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 ZNF235Q14590 738 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 LBRQ14739 615 aaKnown RBP16.03■□□□□ 0.16
CHD3-215ENST00000572750 TAZQ16635 292 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 PIP5KL1Q5T9C9 394 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 KAZNQ674X7 775 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.03■□□□□ 0.16
CHD3-215ENST00000572750 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 SYCE1Q8N0S2 351 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 TMIEQ8NEW7 156 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 ALG3Q92685 438 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 RBM41Q96IZ5 413 aaKnown RBP16.03■□□□□ 0.16
CHD3-215ENST00000572750 LOXL4Q96JB6 756 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 ZNF599Q96NL3 588 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 SMOC1Q9H4F8 434 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 SGK2Q9HBY8 427 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 PCDHA3Q9Y5H8 950 aa16.03■□□□□ 0.16
CHD3-215ENST00000572750 MAST4O15021 2626 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 hCG_1818297A0A087WSY0 165 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 ZRANB2O95218 330 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHD3-215ENST00000572750 PIGNO95427 931 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 ITGB7P26010 798 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 ADCY2Q08462 1091 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
CHD3-215ENST00000572750 MYLK3Q32MK0 819 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 SPDYCQ5MJ68 293 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 NCEH1Q6PIU2 408 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 PARS2Q7L3T8 475 aaKnown RBP16.02■□□□□ 0.16
CHD3-215ENST00000572750 PLPP6Q8IY26 295 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 OR14C36Q8NHC7 312 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 SNX19Q92543 992 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 FAM131CQ96AQ9 280 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 HAUS1Q96CS2 278 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 PPP1R16AQ96I34 528 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.16
CHD3-215ENST00000572750 DYRK4Q9NR20 520 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 AMFRQ9UKV5 643 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 PPP2R2CQ9Y2T4 447 aa16.02■□□□□ 0.16
CHD3-215ENST00000572750 BCLAF3A2AJT9 711 aaKnown RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 CCDC66A2RUB6 948 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 CST8O60676 142 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 POP4O95707 220 aaKnown RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 KCNA4P22459 653 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 SFSWAPQ12872 951 aaKnown RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 DCAF12L1Q5VU92 463 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 TCEAL6Q6IPX3 200 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 RCOR2Q8IZ40 523 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 CCNYQ8ND76 341 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 CADM4Q8NFZ8 388 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 PIGKQ92643 395 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 TCEAL3Q969E4 200 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 HDAC11Q96DB2 347 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 KLHL32Q96NJ5 620 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 OLFM3Q96PB7 478 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 PSKH2Q96QS6 385 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 LGMNQ99538 433 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 HERPUD2Q9BSE4 406 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 HEMGNQ9BXL5 484 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 TMEM74BQ9NUR3 256 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
CHD3-215ENST00000572750 ZMIZ1Q9ULJ6 1067 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 PCDHGA5Q9Y5G8 931 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 IGSF10Q6WRI0 2623 aa16.01■□□□□ 0.15
CHD3-215ENST00000572750 TP53BP1Q12888 1972 aaPredicted RBP16■□□□□ 0.15
CHD3-215ENST00000572750 TTC24A2A3L6 582 aaPredicted RBP16■□□□□ 0.15
CHD3-215ENST00000572750 LRRC72A6NJI9 287 aa16■□□□□ 0.15
CHD3-215ENST00000572750 SLC7A4O43246 635 aa16■□□□□ 0.15
CHD3-215ENST00000572750 PLRG1O43660 514 aaKnown RBP16■□□□□ 0.15
CHD3-215ENST00000572750 FSBPO95073 299 aa16■□□□□ 0.15
CHD3-215ENST00000572750 IGHV4-34P06331 123 aa16■□□□□ 0.15
CHD3-215ENST00000572750 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
CHD3-215ENST00000572750 MX2P20592 715 aa16■□□□□ 0.15
CHD3-215ENST00000572750 MAOBP27338 520 aa16■□□□□ 0.15
CHD3-215ENST00000572750 MMP13P45452 471 aa16■□□□□ 0.15
CHD3-215ENST00000572750 PEX5P50542 639 aa16■□□□□ 0.15
CHD3-215ENST00000572750 NEK3P51956 506 aa16■□□□□ 0.15
CHD3-215ENST00000572750 RWDD2BP57060 319 aa16■□□□□ 0.15
CHD3-215ENST00000572750 TAS2R38P59533 333 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms