RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 NSUN2Q08J23 767 aaKnown RBP eCLIP3.86□□□□□ -1.79
CDC27-213ENST00000571643 DLGAP5Q15398 846 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 TTC31Q49AM3 519 aaPredicted RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 KLHL22Q53GT1 634 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 TMEM196Q5HYL7 178 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 INTS11Q5TA45 600 aaKnown RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 FAAH2Q6GMR7 532 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 ISM2Q6H9L7 571 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 KIAA1161Q6NSJ0 714 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 C4orf50Q6ZRC1 276 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 USP50Q70EL3 339 aaPredicted RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 TFAP2DQ7Z6R9 452 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 SRLQ86TD4 932 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 BRSK2Q8IWQ3 736 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 FAM47BQ8NA70 645 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 AGBL3Q8NEM8 1001 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 WIPF2Q8TF74 440 aaPredicted RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 ZFPM2Q8WW38 1151 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 ASB12Q8WXK4 309 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 ANP32BQ92688 251 aaKnown RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 CCDC34Q96HJ3 373 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 THOC3Q96J01 351 aaKnown RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 COA1Q9GZY4 146 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 OSBPL5Q9H0X9 879 aaPredicted RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 AGO4Q9HCK5 861 aaKnown RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 HELLSQ9NRZ9 838 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 ZBTB40Q9NUA8 1239 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 FAM50BQ9Y247 325 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 UBE2J1Q9Y385 318 aaPredicted RBP3.86□□□□□ -1.79
CDC27-213ENST00000571643 PCDHB2Q9Y5E7 798 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 TAF1P21675 1872 aa3.86□□□□□ -1.79
CDC27-213ENST00000571643 PRYO14603 147 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 APOL1O14791 398 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 KPNA5O15131 536 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 PMM2O15305 246 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 CTIFO43310 598 aaKnown RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 UFL1O94874 794 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 BAG2O95816 211 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 ALPLP05186 524 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 T-ENOLP0DO92 83 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 HOXC13P31276 330 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 IDUAP35475 653 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 IL15P40933 162 aaPredicted RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 PIK3CBP42338 1070 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 GRK6P43250 576 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 MAPK9P45984 424 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 STT3AP46977 705 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 TDO2P48775 406 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 HTR6P50406 440 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 PRELPP51888 382 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 PGGT1BP53609 377 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 C1QTNF8P60827 252 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 ROR1Q01973 937 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 BTKQ06187 659 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 CHRNDQ07001 517 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 FHL3Q13643 280 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 SMC1AQ14683 1233 aaKnown RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 ANXA2RQ3ZCQ2 193 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 ACSM6Q6P461 480 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 RFX8Q6ZV50 586 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 SNX32Q86XE0 403 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 RFX6Q8HWS3 928 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 RPAP2Q8IXW5 612 aaPredicted RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 ANKRD44Q8N8A2 993 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 RNF152Q8N8N0 203 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 ADPRHL1Q8NDY3 354 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 POF1BQ8WVV4 589 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 IGFBPL1Q8WX77 278 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 TBC1D20Q96BZ9 403 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 GCC1Q96CN9 775 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 PRR11Q96HE9 360 aaPredicted RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 CLMNQ96JQ2 1002 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 IWS1Q96ST2 819 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 TAF1DQ9H5J8 278 aaPredicted RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 CDCP1Q9H5V8 836 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 MOV10Q9HCE1 1003 aaKnown RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 TBC1D22BQ9NU19 505 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 FBXO28Q9NVF7 368 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 POLLQ9UGP5 575 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 HACL1Q9UJ83 578 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 DDX19BQ9UMR2 479 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 PCDHB7Q9Y5E2 793 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 LRRFIP2Q9Y608 721 aaKnown RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 PDS5AQ29RF7 1337 aaKnown RBP3.85□□□□□ -1.79
CDC27-213ENST00000571643 DUOX1Q9NRD9 1551 aa3.85□□□□□ -1.79
CDC27-213ENST00000571643 TRBV5-3A0A0A0MS03 114 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 C16orf96A6NNT2 1141 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 SMTNL1A8MU46 457 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 EYA2O00167 538 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 SPTLC2O15270 562 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 ECE2O60344 883 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 PLOD3O60568 738 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 DDNO94850 711 aaPredicted RBP3.84□□□□□ -1.79
CDC27-213ENST00000571643 MBD4O95243 580 aa3.84□□□□□ -1.79
CDC27-213ENST00000571643 IFIT1P09914 478 aaKnown RBP3.84□□□□□ -1.79
CDC27-213ENST00000571643 CTNNA1P35221 906 aaKnown RBP3.84□□□□□ -1.79
CDC27-213ENST00000571643 ANP32AP39687 249 aaKnown RBP3.84□□□□□ -1.79
CDC27-213ENST00000571643 UBA7P41226 1012 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms