RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 PARS2Q7L3T8 475 aaKnown RBP9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 RGL4Q8IZJ4 473 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 OR14C36Q8NHC7 312 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 EXD1Q8NHP7 514 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 BIRC7Q96CA5 298 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 HDAC11Q96DB2 347 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 PPP1R16AQ96I34 528 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 TSGA13Q96PP4 275 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 MAK16Q9BXY0 300 aaKnown RBP9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 HDAC8Q9BY41 377 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 SMOC1Q9H4F8 434 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 DYRK4Q9NR20 520 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 VPS45Q9NRW7 570 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 SEPT3Q9UH03 358 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 PCDHA3Q9Y5H8 950 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 CAPN6Q9Y6Q1 641 aa9.72□□□□□ -0.85
HCCAT5-201ENST00000569990 hCG_1818297A0A087WSY0 165 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PATE3B3GLJ2 98 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 KRT86O43790 486 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 NRDCO43847 1150 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 FSBPO95073 299 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CCDC175P0C221 793 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 KRT10P13645 584 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ZFXP17010 805 aaPredicted RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 MX2P20592 715 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CCNCP24863 283 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CTNNA2P26232 953 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 MAOBP27338 520 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PEX5P50542 639 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 NEK3P51956 506 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 NSUN2Q08J23 767 aaKnown RBP eCLIP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CCDC15Q0P6D6 951 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 HNRNPDQ14103 355 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TFDP2Q14188 446 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ZNF235Q14590 738 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 SF3A2Q15428 464 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ZNF805Q5CZA5 627 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TFDP3Q5H9I0 405 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 MARC1Q5VT66 337 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TCEAL6Q6IPX3 200 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 GDPD4Q6W3E5 623 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PRR23CQ6ZRP0 262 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ZNF662Q6ZS27 426 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PEX26Q7Z412 305 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 NT5DC3Q86UY8 548 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 RFX6Q8HWS3 928 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 KIAA2013Q8IYS2 634 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 RCOR2Q8IZ40 523 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 SYCE1Q8N0S2 351 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PGBD5Q8N414 524 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 RNF10Q8N5U6 811 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TEX26Q8N6G2 289 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 NSMCE1Q8WV22 266 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 MAML1Q92585 1016 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TCEAL3Q969E4 200 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 FATE1Q969F0 183 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 RBM41Q96IZ5 413 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ZNF830Q96NB3 372 aaPredicted RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 KLHL32Q96NJ5 620 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 OLFM3Q96PB7 478 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 MGME1Q9BQP7 344 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 ORAI3Q9BRQ5 295 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TSGA10Q9BZW7 698 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 EIF2B4Q9UI10 523 aaKnown RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 HEY1Q9Y5J3 304 aa9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 PTPRZ1P23471 2315 aaPredicted RBP9.71□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3DA0A087WVF3 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3IA0A087WXS9 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3EA0A087X179 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3KA0A087X1G2 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3FA6NER0 549 aaPredicted RBP9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 C16orf96A6NNT2 1141 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3LB9A6J9 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 MATN3O15232 486 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 LATO43561 262 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 FOXD2O60548 495 aaPredicted RBP9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 CST8O60676 142 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 GJB3O75712 270 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 PIGNO95427 931 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 FTCDO95954 541 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 TBC1D3HP0C7X1 549 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 ADRB3P13945 408 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 CR2P20023 1033 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 CD27P26842 260 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 HSPA9P38646 679 aaKnown RBP9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 ABL2P42684 1182 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 MMP13P45452 471 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 RENBPP51606 427 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 CCR5P51681 352 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 RWDD2BP57060 319 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 COPS2P61201 443 aa9.7□□□□□ -0.86
HCCAT5-201ENST00000569990 AP1S1P61966 158 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms