RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CELF1Q92879 486 aaKnown RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 ZNF764Q96H86 408 aaPredicted RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 ZNF845Q96IR2 970 aaPredicted RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 C5orf34Q96MH7 638 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 NR1H4Q96RI1 486 aaPredicted RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 SERINC2Q96SA4 455 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 RNF26Q9BY78 433 aaPredicted RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 CCDC68Q9H2F9 335 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 RANBP17Q9H2T7 1088 aaKnown RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 SLC32A1Q9H598 525 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 EPHX3Q9H6B9 360 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBR1-211ENST00000569971 NSMCE4AQ9NXX6 385 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 GAR1Q9NY12 217 aaKnown RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 LRIT1Q9P2V4 623 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 ADD3Q9UEY8 706 aaKnown RBP3.97□□□□□ -1.77
UBR1-211ENST00000569971 VPS28Q9UK41 221 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 PKP3Q9Y446 797 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 TTLL3Q9Y4R7 772 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 SBNO1A3KN83 1393 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 ARHGEF10O15013 1369 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 FLT4P35916 1363 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 KIAA0232Q92628 1395 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 KAT6AQ92794 2004 aa3.97□□□□□ -1.77
UBR1-211ENST00000569971 ABCC4O15439 1325 aa3.96□□□□□ -1.77
UBR1-211ENST00000569971 PTPRCP08575 1304 aa3.96□□□□□ -1.77
UBR1-211ENST00000569971 FMN2Q9NZ56 1722 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TCRBV5S1A1TA0A578 114 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TMEM232C9JQI7 657 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 HTATSF1O43719 755 aaKnown RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 SCGB1D1O95968 90 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 ENO1P06733 434 aaKnown RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 PSMA4P25789 261 aaKnown RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 LMO1P25800 156 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TYK2P29597 1187 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 PLA2G5P39877 138 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 ADPRHP54922 357 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 DMWDQ09019 674 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 CUL4AQ13619 759 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 KCNB1Q14721 858 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 SLC18A3Q16572 532 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 AWAT1Q58HT5 328 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 ZNF667Q5HYK9 610 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 CFAP58Q5T655 872 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TTLL5Q6EMB2 1281 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 ZNF280DQ6N043 979 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 GJB7Q6PEY0 223 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TMEM65Q6PI78 240 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 SLC30A9Q6PML9 568 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 Q6YL49 198 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 RTL10Q7L3V2 364 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 MDGA2Q7Z553 956 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 HSCBQ8IWL3 235 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TMTC2Q8N394 836 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TTC39CQ8N584 583 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 C8orf58Q8NAV2 365 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 SETD9Q8NE22 299 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 PERPQ96FX8 193 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 FYTTD1Q96QD9 318 aaKnown RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 PIP5K1AQ99755 562 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 THUMPD2Q9BTF0 503 aaKnown RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 HEMGNQ9BXL5 484 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TRIM2Q9C040 744 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 TMEM248Q9NWD8 314 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 ARL15Q9NXU5 204 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 IL1RAPL1Q9NZN1 696 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 FOXJ2Q9P0K8 574 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 PEMTQ9UBM1 199 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 FBXO4Q9UKT5 387 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 DTX4Q9Y2E6 619 aa3.96□□□□□ -1.78
UBR1-211ENST00000569971 SIRT4Q9Y6E7 314 aaPredicted RBP3.96□□□□□ -1.78
UBR1-211ENST00000569971 SOS1Q07889 1333 aaPredicted RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 SSH2Q76I76 1423 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 PTPRUQ92729 1446 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 RGPD1P0DJD0 1748 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 XRN1Q8IZH2 1706 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 DLG5Q8TDM6 1919 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 TEX13CA0A0J9YWL9 993 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 A0A1W2PQM1 296 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 TCRBV7S3A2A0A539 114 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 MCIDASD6RGH6 385 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 PTGES3LE9PB15 166 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 GTPBP1O00178 669 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 CHL1O00533 1208 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CEP104O60308 925 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CCNT1O60563 726 aaKnown RBP3.95□□□□□ -1.78
UBR1-211ENST00000569971 HMMRO75330 724 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 SGPL1O95470 568 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 TUBB4AP04350 444 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 CHRM4P08173 479 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 AKR1B1P15121 316 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 DRD4P21917 467 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 TGM2P21980 687 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 NFKBIAP25963 317 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 ABCD1P33897 745 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 IDUAP35475 653 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 KRT20P35900 424 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 GJC1P36383 396 aa3.95□□□□□ -1.78
UBR1-211ENST00000569971 HADHAP40939 763 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms