RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PCDHB7Q9Y5E2 793 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PCDHA5Q9Y5H7 936 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 PCDHA10Q9Y5I2 948 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 MTCH2Q9Y6C9 303 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 UMODL1Q5DID0 1318 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 SCN10AQ9Y5Y9 1956 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 MUC6Q6W4X9 2439 aa3.38□□□□□ -1.87
CNOT1-221ENST00000569924 LCTP09848 1927 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 A0A1W2PQ09 198 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PMS2P1A4D2B8 440 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 MBD3L5A6NJ08 208 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 MYO1GB0I1T2 1018 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TEX22C9J3V5 150 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 H0Y626 953 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 AGPSO00116 658 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 WIPF1O43516 503 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TBX10O75333 385 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SEC14L2O76054 403 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PRSS23O95084 383 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ICAM1P05362 532 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ITGB1P05556 798 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CA3P07451 260 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF888P0CJ79 500 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RARGP13631 454 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ALADP13716 330 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 MYOGP15173 224 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF28P17035 718 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CDH2P19022 906 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CHRM3P20309 590 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PSMA3P25788 255 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 EEF1DP29692 281 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 GCH1P30793 250 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PPARGP37231 505 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 GSTM5P46439 218 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PDE6CP51160 858 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 NCKAP1LP55160 1127 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PSMC6P62333 389 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SRSF3P84103 164 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TFAP4Q01664 338 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PPARDQ03181 441 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF844Q08AG5 666 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 WASHC5Q12768 1159 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 IKQ13123 557 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 AIMP2Q13155 320 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 BFSP2Q13515 415 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 THOC5Q13769 683 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 E2F2Q14209 437 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ASIC2Q16515 512 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TBR1Q16650 682 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 BMP2KLQ5H9B9 411 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TCP11X2Q5H9J9 407 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM196Q5HYL7 178 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CERCAMQ5T4B2 595 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM108Q6UXF1 575 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CLEC9AQ6UXN8 241 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 NFXL1Q6ZNB6 911 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 FAM83HQ6ZRV2 1179 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 DOK3Q7L591 496 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 DNAJB7Q7Z6W7 309 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SLFN11Q7Z7L1 901 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ADGRG6Q86SQ4 1221 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 XYLT1Q86Y38 959 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RAB11FIP4Q86YS3 637 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 FBXO16Q8IX29 292 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CEP57L1Q8IYX8 460 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ADGRF2Q8IZF7 708 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 OR8H3Q8N146 312 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SCML4Q8N228 414 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 FSTL5Q8N475 847 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CARNMT1Q8N4J0 409 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 FRMD1Q8N878 549 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TNIP2Q8NFZ5 429 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 OR14K1Q8NGZ2 314 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RFWD2Q8NHY2 731 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM171Q8WVE6 324 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RUFY2Q8WXA3 655 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 OVCA2Q8WZ82 227 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 NCSTNQ92542 709 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF764Q96H86 408 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 KIRREL1Q96J84 757 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 LRIG1Q96JA1 1093 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 MTG1Q9BT17 334 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 MAK16Q9BXY0 300 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 WDR11Q9BZH6 1224 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 NAPBQ9H115 298 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 C2orf40Q9H1Z8 148 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 DCTPP1Q9H773 170 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 NRDE2Q9H7Z3 1164 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 L2HGDHQ9H9P8 463 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 KCNK9Q9NPC2 374 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 PDGFCQ9NRA1 345 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 RXFP3Q9NSD7 469 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 ALKBH4Q9NXW9 302 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 EHD2Q9NZN4 543 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SEL1LQ9UBV2 794 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 LIMA1Q9UHB6 759 aaKnown RBP3.37□□□□□ -1.87
CNOT1-221ENST00000569924 SLCO3A1Q9UIG8 710 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CD207Q9UJ71 328 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 GTF3C4Q9UKN8 822 aa3.37□□□□□ -1.87
CNOT1-221ENST00000569924 CCPG1Q9ULG6 757 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms