RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SMOC1Q9H4F8 434 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 CATSPERBQ9H7T0 1116 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 FBXL12Q9NXK8 326 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 MPP6Q9NZW5 540 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 CNOT8Q9UFF9 292 aaKnown RBP4.94□□□□□ -1.62
CNOT1-219ENST00000569882 OR12D3Q9UGF7 316 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 CLEC4EQ9ULY5 219 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 SCML1Q9UN30 329 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 ERVW-1Q9UQF0 538 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 HS3ST4Q9Y661 456 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 NYNRINQ9P2P1 1898 aaKnown RBP4.94□□□□□ -1.62
CNOT1-219ENST00000569882 ITIH6Q6UXX5 1313 aa4.94□□□□□ -1.62
CNOT1-219ENST00000569882 PLXND1Q9Y4D7 1925 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 DOCK4Q8N1I0 1966 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 IGHV1OR15-9A0A0B4J2B8 117 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 A0A1W2PQF6 199 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 BCLAF3A2AJT9 711 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TARSL2A2RTX5 802 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ANTXRLA6NF34 631 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 LRRC72A6NJI9 287 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SIGLEC16A6NMB1 481 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TTC34A8MYJ7 566 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 EEF2KO00418 725 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 KPNA3O00505 521 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 NEMP1O14524 444 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CCP110O43303 1012 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 AKR1B10O60218 316 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RAMP2O60895 175 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RTN2O75298 545 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ENDOD1O94919 500 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 GJB6O95452 261 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ECEL1O95672 775 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SEMA4FO95754 770 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 IGLV3-25P01717 112 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SERPING1P05155 500 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 PLEKP08567 350 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ZNF806P0C7X5 589 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SKILP12757 684 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 UNGP13051 313 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CHRNB2P17787 502 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TFE3P19532 575 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ITPKAP23677 461 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RRM1P23921 792 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RFC1P35251 1148 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 GJC1P36383 396 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ARL4AP40617 200 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 PTPN9P43378 593 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 STK19P49842 368 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TPMTP51580 245 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ZNF143P52747 638 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ATXN1P54253 815 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 AIF1P55008 147 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 C21orf59P57076 290 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ZBED6P86452 979 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ZBTB16Q05516 673 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RAD51Q06609 339 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 PCDH1Q08174 1060 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CAMK2GQ13555 558 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 KRT81Q14533 505 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ELAVL3Q14576 367 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 IQCB1Q15051 598 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CST6Q15828 149 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 HADHQ16836 314 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 HNRNPA1L2Q32P51 320 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 POM121L1PQ3SYA9 428 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 OTOGLQ3ZCN5 2332 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 HS1BP3Q53T59 392 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SLC45A4Q5BKX6 768 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 PPP6R3Q5H9R7 873 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 FSCBQ5H9T9 825 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SPDYCQ5MJ68 293 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SPECC1LQ69YQ0 1117 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TCEAL6Q6IPX3 200 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 MON1BQ7L1V2 547 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ARCQ7LC44 396 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 SETD3Q86TU7 594 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ADIPOR2Q86V24 386 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CCNJLQ8IV13 435 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 MMAAQ8IVH4 418 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 MCOLN2Q8IZK6 566 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 STK40Q8N2I9 435 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 DCAF4L2Q8NA75 395 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 OR14C36Q8NHC7 312 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 JOSD2Q8TAC2 188 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 GRIN3AQ8TCU5 1115 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 NSMCE1Q8WV22 266 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CTNNBL1Q8WYA6 563 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 TCEAL3Q969E4 200 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 IGSF8Q969P0 613 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 PGAP3Q96FM1 320 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 VCPIP1Q96JH7 1222 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 C1orf74Q96LT6 269 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 FEM1AQ9BSK4 669 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 RTKNQ9BST9 563 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 CNPY3Q9BT09 278 aa4.93□□□□□ -1.62
CNOT1-219ENST00000569882 XPO4Q9C0E2 1151 aaKnown RBP4.93□□□□□ -1.62
CNOT1-219ENST00000569882 MKRN2Q9H000 416 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms