RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PCDHGB6Q9Y5F9 930 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CCDC88CQ9P219 2028 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.73□□□□□ -1.334e-7■■■□□ 16.2
HERPUD1-217ENST00000569429 PIPSLA2A3N6 862 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 TYW5A2RUC4 315 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 GOLGA8IPA6NC78 632 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 GOLGA8JA6NMD2 632 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 KPNA3O00505 521 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 KATNA1O75449 491 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 CD1CP29017 333 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 EIF4A3P38919 411 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 PLK1P53350 603 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 IST1P53990 364 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 OR1D5P58170 312 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 DPYDQ12882 1025 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 STK3Q13188 491 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 SGCGQ13326 291 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 CPZQ66K79 652 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 ZNF720Q7Z2F6 126 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 MRGPRGQ86SM5 289 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 ACOT1Q86TX2 421 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 SFR1Q86XK3 245 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 WDR49Q8IV35 697 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 CARNMT1Q8N4J0 409 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 TMIEQ8NEW7 156 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 NUDT8Q8WV74 236 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 NINJ1Q92982 152 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 AZIN2Q96A70 460 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 JAKMIP2Q96AA8 810 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 PRICKLE1Q96MT3 831 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 CTRCQ99895 268 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 DYRK4Q9NR20 520 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 OLA1Q9NTK5 396 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 RYDENQ9NUL5 291 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 PDP2Q9P2J9 529 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 USP25Q9UHP3 1055 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 G3BP2Q9UN86 482 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 EXOC7Q9UPT5 735 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 B3GNT3Q9Y2A9 372 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 NTNG1Q9Y2I2 539 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 ARID1AO14497 2285 aa6.73□□□□□ -1.33
HERPUD1-217ENST00000569429 GOLGA6L7A0A1B0GV03 622 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 FRMD3A2A2Y4 597 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 E2F3O00716 465 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 AP1G1O43747 822 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 ACSL4O60488 711 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 RASGRP1O95267 797 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 PYGBP11216 843 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 EDN3P14138 238 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 FDPSP14324 419 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 PSMA5P28066 241 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 ADORA2BP29275 332 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 ATICP31939 592 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 CHRNA3P32297 505 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 SLC11A2P49281 568 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 PEX5P50542 639 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 YWHAGP61981 247 aaKnown RBP eCLIP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 RPS24P62847 133 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 YBX1P67809 324 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 CHAF1BQ13112 559 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 SLC12A1Q13621 1099 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 DLG2Q15700 870 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 UGT8Q16880 541 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 ALG11Q2TAA5 492 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 ACCSLQ4AC99 568 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 EFHC1Q5JVL4 640 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 DCAF10Q5QP82 559 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 Q6ZVU0 165 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 Q71RC1 249 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 HID1Q8IV36 788 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 PARP9Q8IXQ6 854 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 NAGSQ8N159 534 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 C12orf29Q8N999 325 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 FDCSPQ8NFU4 85 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 RBM15Q96T37 977 aaKnown RBP eCLIP6.72□□□□□ -1.332e-10■□□□□ 10
HERPUD1-217ENST00000569429 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 NUDT9Q9BW91 350 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 STRA6Q9BX79 667 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 SMYD3Q9H7B4 428 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 APMAPQ9HDC9 416 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 C5AR2Q9P296 337 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 FARP1Q9Y4F1 1045 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 FADS3Q9Y5Q0 445 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 HCFC1P51610 2035 aa6.72□□□□□ -1.33
HERPUD1-217ENST00000569429 SSU72P8A0A1W2PR75 194 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 IGLON5A6NGN9 336 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 ARGFXA6NJG6 315 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 TMEM110-MUSTN1A8MSY1 372 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 KIAA0391O15091 583 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 FANCGO15287 622 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 STX6O43752 255 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 CTDNEP1O95476 244 aa6.71□□□□□ -1.34
HERPUD1-217ENST00000569429 IGLV3-27P01718 113 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms