RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ATP2A3Q93084 1043 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 RMDN1Q96DB5 314 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 MTBPQ96DY7 904 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 APOPT1Q96IL0 206 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 ZNF317Q96PQ6 595 aaPredicted RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 SRPK1Q96SB4 655 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 ELAC2Q9BQ52 826 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 KIFC1Q9BW19 673 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 PIDD1Q9HB75 910 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 PDFQ9HBH1 243 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 DNMT3BQ9UBC3 853 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 TBC1D30Q9Y2I9 924 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 TCAF1Q9Y4C2 921 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 DENND4CQ5VZ89 1909 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 UNC80Q8N2C7 3258 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 HMX2A2RU54 273 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CCL22O00626 93 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TPP1O14773 563 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 RFPL1O75677 317 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 ASMTLO95671 621 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TOP3BO95985 862 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 TYK2P29597 1187 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 RGRP47804 291 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TMPRSS15P98073 1019 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CDK18Q07002 472 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 DNAJC3Q13217 504 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CTBP1Q13363 440 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 GPM6BQ13491 265 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 THOC5Q13769 683 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 ARHGAP15Q53QZ3 475 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SIRPB2Q5JXA9 342 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TEDDM1Q5T9Z0 273 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CDHR3Q6ZTQ4 885 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 MICALCLQ6ZW33 695 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SHKBP1Q8TBC3 707 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 THOC1Q96FV9 657 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 MAGEB18Q96M61 343 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CPNE1Q99829 537 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 FEM1AQ9BSK4 669 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 NSRP1Q9H0G5 558 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 VPS11Q9H270 941 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 NOD2Q9HC29 1040 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SCUBE2Q9NQ36 999 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 GRID1Q9ULK0 1009 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CHKBQ9Y259 395 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 FCF1Q9Y324 198 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 HCFC2Q9Y5Z7 792 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CHD5Q8TDI0 1954 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CCDC195A0A1B0GUA6 201 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 HEATR9A2RTY3 570 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TM9SF1O15321 606 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 GREM1O60565 184 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 XYLBO75191 536 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CYBBP04839 570 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PAMP19021 973 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 DRD4P21917 467 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 FOXN2P32314 431 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PBX2P40425 430 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SLC7A9P82251 487 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 ARF5P84085 180 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 UBE3AQ05086 875 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SLC5A9Q2M3M2 681 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PDPK2PQ6A1A2 396 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 Q6ZNB5 142 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CMC1Q7Z7K0 106 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 DENND6AQ8IWF6 608 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CMTM8Q8IZV2 173 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 C12orf76Q8N812 135 aaPredicted RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 OR6P1Q8NGX9 317 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 DENND1AQ8TEH3 1009 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PTPRN2Q92932 1015 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 FATE1Q969F0 183 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CABS1Q96KC9 395 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 ZNF599Q96NL3 588 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PSKH2Q96QS6 385 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TM6SF2Q9BZW4 377 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 STOML2Q9UJZ1 356 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CLEC4EQ9ULY5 219 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PCDHGC4Q9Y5F7 938 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 MYLKQ15746 1914 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SRRM3A6NNA2 597 aaPredicted RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 BNIP3LO60238 219 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 TMCC1O94876 653 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 LATS1O95835 1130 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 MT-CO1P00395 513 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 ALDOAP04075 364 aaKnown RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 CNTFP26441 200 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SPRP35270 261 aaPredicted RBP7.14□□□□□ -1.27
SMG1-215ENST00000568239 GMPRP36959 345 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 RHOAP61586 193 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 SLC18A2Q05940 514 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PPM1JQ5JR12 505 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 GRTP1Q5TC63 336 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 FSTL4Q6MZW2 842 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 TMC5Q6UXY8 1006 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 RAPH1Q70E73 1250 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 HTR3DQ70Z44 454 aa7.14□□□□□ -1.27
SMG1-215ENST00000568239 PTAR1Q7Z6K3 402 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms