RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TIMP2P16035 220 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 CR2P20023 1033 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 AMPD1P23109 780 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ARL4AP40617 200 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 MAPK8P45983 427 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ZNF75DP51815 510 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 FGL2Q14314 439 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PAFAH1B3Q15102 231 aaKnown RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 AGERQ15109 404 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PDK2Q15119 407 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 SHBQ15464 509 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 SETMARQ53H47 684 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PPP6R3Q5H9R7 873 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 LRRC38Q5VT99 294 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 NAPEPLDQ6IQ20 393 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PARS2Q7L3T8 475 aaKnown RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 KANSL1Q7Z3B3 1105 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 TP53INP2Q8IXH6 220 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 RHOT2Q8IXI1 618 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 CCDC170Q8IYT3 715 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 TEX26Q8N6G2 289 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 OR2I1PQ8NGU4 316 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 GDAP1L1Q96MZ0 367 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ZNF641Q96N77 438 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC6A18Q96N87 628 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PSKH2Q96QS6 385 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 PANX2Q96RD6 677 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 TUBGCP5Q96RT8 1024 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ZNF670Q9BS34 389 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 TRIM5Q9C035 493 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 GAREM1Q9H706 876 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 IL21RQ9HBE5 538 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ETNK2Q9NVF9 386 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 UBA2Q9UBT2 640 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 FNDC3AQ9Y2H6 1198 aaKnown RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 SNX11Q9Y5W9 270 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 MYLKQ15746 1914 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 NCOR2Q9Y618 2525 aa8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 ARHGEF17Q96PE2 2063 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-205ENST00000568129 A0A0A6YYK5 440 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 A0A1W2PQU0 124 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 FAM47DPA6NHR8 397 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 C3orf70A6NLC5 250 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TLR4O00206 839 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TRAFD1O14545 582 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 GIPC1O14908 333 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 BNIP3LO60238 219 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 BUB1BO60566 1050 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 MAGEC1O60732 1142 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 IGSF6O95976 241 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 KRT7P08729 469 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 GKP32189 559 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ABL2P42684 1182 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ATXN3P54252 364 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 NXPH1P58417 271 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TAS2R40P59535 323 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 RPS21P63220 83 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 RAD51Q06609 339 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 DPYSL3Q14195 570 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TAZQ16635 292 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 HADHQ16836 314 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SMTNL2Q2TAL5 461 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TMEM52BQ4KMG9 183 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 RALGPS1Q5JS13 557 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ATXN7L2Q5T6C5 722 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ALG1LQ6GMV1 187 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 FBXL19Q6PCT2 694 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 GDPD4Q6W3E5 623 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ARHGAP36Q6ZRI8 547 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ABI3BPQ7Z7G0 1075 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SPATS2Q86XZ4 545 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CPNE8Q86YQ8 564 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CBARPQ8N350 705 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 PCDH19Q8TAB3 1148 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 GRIN3AQ8TCU5 1115 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 RFFLQ8WZ73 363 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SNX19Q92543 992 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SKA1Q96BD8 255 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CENPTQ96BT3 561 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 IFT43Q96FT9 208 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CELF6Q96J87 481 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 FEM1CQ96JP0 617 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 NSMCE3Q96MG7 304 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TSGA13Q96PP4 275 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 KLF6Q99612 283 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC17A9Q9BYT1 436 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TM6SF2Q9BZW4 377 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC32A1Q9H598 525 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SUV39H2Q9H5I1 410 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms