RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 PRKD2Q9BZL6 878 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 ABHD16BQ9H3Z7 469 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MAGEE1Q9HCI5 957 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 MRPL40Q9NQ50 206 aaKnown RBP5.52□□□□□ -1.53
LINC01541-202ENST00000568095 RAB6BQ9NRW1 208 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 NOD1Q9Y239 953 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 TCAF1Q9Y4C2 921 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 CPQQ9Y646 472 aa5.52□□□□□ -1.53
LINC01541-202ENST00000568095 KPNA4O00629 521 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SOCS2O14508 198 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PFDN6O15212 129 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PAPSS1O43252 624 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KLHL41O60662 606 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 JRKO75564 520 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SEC14L2O76054 403 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 VAPBO95292 243 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 LGALS2P05162 132 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 UGT2B4P06133 528 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MCF2P10911 925 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MLNP12872 115 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TGM2P21980 687 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 IL4RP24394 825 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PSMA2P25787 234 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 EIF2B2P49770 351 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NEK2P51955 445 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NME5P56597 212 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PRKCQQ04759 706 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TNK2Q07912 1038 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 LAMC2Q13753 1193 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FRG1Q14331 258 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NR1D2Q14995 579 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TAF1CQ15572 869 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KCNJ8Q15842 424 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SMTNL2Q2TAL5 461 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ZNF394Q53GI3 561 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MTX3Q5HYI7 312 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KCNT1Q5JUK3 1230 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 C6orf10Q5SRN2 563 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 GJC2Q5T442 439 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SLC9A4Q6AI14 798 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NPNTQ6UXI9 565 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 USP51Q70EK9 711 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CHSY3Q70JA7 882 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 IGFN1Q86VF2 1251 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SDR16C5Q8N3Y7 309 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MCPH1Q8NEM0 835 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 JOSD2Q8TAC2 188 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ATP2A3Q93084 1043 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FAM84AQ96KN4 292 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FAM167AQ96KS9 214 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FRMD6Q96NE9 622 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PEBP4Q96S96 227 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CGRRF1Q99675 332 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SH2D3AQ9BRG2 576 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FAM213AQ9BRX8 229 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DCUN1D5Q9BTE7 237 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 C1orf50Q9BV19 199 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ARHGAP39Q9C0H5 1083 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 EFCAB1Q9HAE3 211 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 C8orf4Q9NR00 106 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ERVK-11Q9UQG0 969 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 Q9Y3F1 56 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 RGS13O14921 159 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 GAS2O43903 313 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DGKIO75912 1065 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 IL18RAPO95256 599 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 F2P00734 622 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TXNP10599 105 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MX2P20592 715 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TGM1P22735 817 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NFKBIAP25963 317 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SERPINB5P36952 375 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 NAMPTP43490 491 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 GSSP48637 474 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 STAT5BP51692 787 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 MLLT10P55197 1068 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PKNOX1P55347 436 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SEMA5AQ13591 1074 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CAPSQ13938 189 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 LRP8Q14114 963 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TAF5Q15542 800 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 IQSEC1Q6DN90 963 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KRT80Q6KB66 452 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 SPRED1Q7Z699 444 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CADM3Q8N126 398 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PELI3Q8N2H9 469 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TMEM151AQ8N4L1 468 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TAB3Q8N5C8 712 aaPredicted RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PLD5Q8N7P1 536 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 FAM47BQ8NA70 645 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TDRD5Q8NAT2 981 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 KCTD6Q8NC69 237 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 PNPT1Q8TCS8 783 aaKnown RBP5.51□□□□□ -1.53
LINC01541-202ENST00000568095 DEPDC1BQ8WUY9 529 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 TAMM41Q96BW9 452 aa5.51□□□□□ -1.53
LINC01541-202ENST00000568095 CCDC138Q96M89 665 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms