RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 HORMAD1Q86X24 394 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 NPWQ8N729 165 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 MFSD2AQ8NA29 543 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 TMEM145Q8NBT3 493 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 CASKIN2Q8WXE0 1202 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 MRFAP1L1Q96HT8 127 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 PDFQ9HBH1 243 aa25.54■■□□□ 1.68
FANCA-228ENST00000567943 AMPD1P23109 780 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 NUDT1P36639 197 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 NEK3P51956 506 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 NXPH1P58417 271 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 CYTH1Q15438 398 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 MYLK3Q32MK0 819 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 TMEM259Q4ZIN3 620 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 SETMARQ53H47 684 aaPredicted RBP25.53■■□□□ 1.68
FANCA-228ENST00000567943 INO80DQ53TQ3 878 aaPredicted RBP25.53■■□□□ 1.68
FANCA-228ENST00000567943 AFMIDQ63HM1 303 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 SEL1L3Q68CR1 1132 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 GLRX5Q86SX6 157 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 ARHGAP12Q8IWW6 846 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 PPP1R16AQ96I34 528 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 ELF4Q99607 663 aaPredicted RBP25.53■■□□□ 1.68
FANCA-228ENST00000567943 PCDH18Q9HCL0 1135 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 FADS3Q9Y5Q0 445 aa25.53■■□□□ 1.68
FANCA-228ENST00000567943 ARID1BQ8NFD5 2236 aaPredicted RBP25.53■■□□□ 1.68
FANCA-228ENST00000567943 KMT2BQ9UMN6 2715 aaPredicted RBP25.53■■□□□ 1.68
FANCA-228ENST00000567943 TMEM110-MUSTN1A8MSY1 372 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 J3KR12 359 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 DFFAO00273 331 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 KRIT1O00522 736 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 SLC31A1O15431 190 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 FLRT2O43155 660 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 SPINT1O43278 529 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 GJC1P36383 396 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 ABL2P42684 1182 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 CCT8P50990 548 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 RHOAP61586 193 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 CCDC15Q0P6D6 951 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 FGL2Q14314 439 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 KRT81Q14533 505 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 SLCO6A1Q86UG4 719 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 SLC35G2Q8TBE7 412 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 LRIG1Q96JA1 1093 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 CSPG4P5Q96PW8 444 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 FZD3Q9NPG1 666 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 LHX3Q9UBR4 397 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 UBA2Q9UBT2 640 aaPredicted RBP25.52■■□□□ 1.68
FANCA-228ENST00000567943 MFHAS1Q9Y4C4 1052 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 PCDHB9Q9Y5E1 797 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 USP24Q9UPU5 2620 aa25.52■■□□□ 1.68
FANCA-228ENST00000567943 C16orf96A6NNT2 1141 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 PRAMEF26H0Y7S4 382 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 HYAL3O43820 417 aaPredicted RBP25.51■■□□□ 1.67
FANCA-228ENST00000567943 PRAMEF11O60813 436 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 PCDH8O95206 1070 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 POP4O95707 220 aaKnown RBP25.51■■□□□ 1.67
FANCA-228ENST00000567943 UGT2B4P06133 528 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 CDH6P55285 790 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 ZNF805Q5CZA5 627 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 IQCHQ86VS3 1027 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 LZTR1Q8N653 840 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 RHBDD1Q8TEB9 315 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 SKA1Q96BD8 255 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 GDAP1L1Q96MZ0 367 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 MYOCQ99972 504 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 SCNM1Q9BWG6 230 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 GDF3Q9NR23 364 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 ETNK2Q9NVF9 386 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 TOR4AQ9NXH8 423 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 LCMT1Q9UIC8 334 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 GGT7Q9UJ14 662 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 PTPRBP23467 1997 aa25.51■■□□□ 1.67
FANCA-228ENST00000567943 INSIG1O15503 277 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 AP1G1O43747 822 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 DFNA5O60443 496 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 FTH1P19P0C7X4 201 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 MESDQ14696 234 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 ATP13A4Q4VNC1 1196 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 FREM2Q5SZK8 3169 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 FBXL19Q6PCT2 694 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 TMCO3Q6UWJ1 677 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 GATAD2AQ86YP4 633 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 TP53INP2Q8IXH6 220 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 PNPLA1Q8N8W4 532 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 SAP25Q8TEE9 199 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 SP110Q9HB58 689 aa25.5■■□□□ 1.67
FANCA-228ENST00000567943 ANKRD36A6QL64 1941 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 IGSF6O95976 241 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 TAS2R40P59535 323 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 STAT4Q14765 748 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 SUZ12Q15022 739 aaKnown RBP25.49■■□□□ 1.67
FANCA-228ENST00000567943 ARHGAP36Q6ZRI8 547 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 RAB44Q7Z6P3 723 aaPredicted RBP25.49■■□□□ 1.67
FANCA-228ENST00000567943 RHOT2Q8IXI1 618 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 TSC1Q92574 1164 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 EXOC2Q96KP1 924 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 KLHL32Q96NJ5 620 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 TMEM121BQ9BXQ6 578 aaPredicted RBP25.49■■□□□ 1.67
FANCA-228ENST00000567943 ERVMER34-1Q9H9K5 563 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 KLK13Q9UKR3 277 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms