RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 TPI1P60174 286 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 DAB2P98082 770 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 SEMG2Q02383 582 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 SGCGQ13326 291 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 CYTH1Q15438 398 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 HES3Q5TGS1 186 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 GDPD4Q6W3E5 623 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 ARFGAP1Q8N6T3 406 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 PEBP4Q96S96 227 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 WRAP53Q9BUR4 548 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 MYO1AQ9UBC5 1043 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 IPO11Q9UI26 975 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 LHX6Q9UPM6 363 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-208ENST00000567843 A6NNZ2 444 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PIAS2O75928 621 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PIGNO95427 931 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 SERPINC1P01008 464 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 FTLP02792 175 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PRKCGP05129 697 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 SERINC3Q13530 473 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 FZD2Q14332 565 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PLEKHA7Q6IQ23 1121 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 TSC1Q92574 1164 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 KCTD15Q96SI1 283 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 SNRNP25Q9BV90 132 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 TTYH3Q9C0H2 523 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 SLC39A8Q9C0K1 460 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 CATSPERBQ9H7T0 1116 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 PARVAQ9NVD7 372 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 LHX3Q9UBR4 397 aa12.39□□□□□ -0.43
GTF3C1-208ENST00000567843 LAMA5O15230 3695 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 A0A1B0GTH6 734 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 SYCE3A1L190 88 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 EEF2KO00418 725 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 FPGTO14772 594 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 DAPK3O43293 454 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TSPAN6O43657 245 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 AP1G1O43747 822 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 IGSF6O95976 241 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TIMP2P16035 220 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 PAPOLAP51003 745 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 YBEYP58557 167 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 IQCB1Q15051 598 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TCEA2Q15560 299 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 PARP15Q460N3 678 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 ARHGAP36Q6ZRI8 547 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TP53INP2Q8IXH6 220 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 CPLX3Q8WVH0 158 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 LRIG1Q96JA1 1093 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 TCEAL2Q9H3H9 227 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 UBA2Q9UBT2 640 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 COQ6Q9Y2Z9 468 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 PCDHGA1Q9Y5H4 931 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 HS3ST3A1Q9Y663 406 aa12.38□□□□□ -0.43
GTF3C1-208ENST00000567843 ATRXP46100 2492 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 A0A1W2PQC6 194 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 WASH4PA8MWX3 477 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 DFFAO00273 331 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 AREL1O15033 823 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 SCAMP1O15126 338 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 TCF4P15884 667 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 DESP17661 470 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 MIPP30301 263 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 RGRP47804 291 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 RAD51Q06609 339 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 C1orf61Q13536 156 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms