RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 A0A1W2PPC4 97 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 C16orf96A6NNT2 1141 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 BCAT2O15382 392 aaPredicted RBP21.92■■□□□ 1.1
NME3-210ENST00000567271 ADRB3P13945 408 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 GARSP41250 739 aaKnown RBP21.92■■□□□ 1.1
NME3-210ENST00000567271 PPP2CBP62714 309 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 PPP2CAP67775 309 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 GBE1Q04446 702 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 KIF5AQ12840 1032 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 ODF2Q5BJF6 829 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 SLC9A4Q6AI14 798 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 FBXL19Q6PCT2 694 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 PLD5Q8N7P1 536 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 MAK16Q9BXY0 300 aaKnown RBP21.92■■□□□ 1.1
NME3-210ENST00000567271 EBF2Q9HAK2 575 aa21.92■■□□□ 1.1
NME3-210ENST00000567271 A0A0U1RQJ8 604 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 MUSKO15146 869 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 LATO43561 262 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 RENBPP51606 427 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 SLC10A2Q12908 348 aaPredicted RBP21.91■■□□□ 1.1
NME3-210ENST00000567271 GRM3Q14832 879 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 TAZQ16635 292 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 NEK5Q6P3R8 708 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 MFSD7Q6UXD7 560 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 SRLQ86TD4 932 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 TRIM69Q86WT6 500 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 KATNAL2Q8IYT4 538 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 NETO1Q8TDF5 533 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 NSMCE1Q8WV22 266 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 EDEM2Q9BV94 578 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 DTLQ9NZJ0 730 aa21.91■■□□□ 1.1
NME3-210ENST00000567271 APOL1O14791 398 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 RNGTTO60942 597 aaKnown RBP21.9■■□□□ 1.1
NME3-210ENST00000567271 MAP3K6O95382 1288 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 ENGP17813 658 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 MX2P20592 715 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 CDKN2BP42772 138 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 IFI16Q16666 785 aaKnown RBP21.9■■□□□ 1.1
NME3-210ENST00000567271 RSPO4Q2I0M5 234 aaPredicted RBP21.9■■□□□ 1.1
NME3-210ENST00000567271 LRRC8AQ8IWT6 810 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 CCDC112Q8NEF3 446 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 KIAA1524Q8TCG1 905 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.9■■□□□ 1.1
NME3-210ENST00000567271 FATE1Q969F0 183 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 RAB7BQ96AH8 199 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 TSGA13Q96PP4 275 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 TM9SF3Q9HD45 589 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 FSCN3Q9NQT6 498 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 DKK3Q9UBP4 350 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
NME3-210ENST00000567271 FADS3Q9Y5Q0 445 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 ADGRG1Q9Y653 693 aa21.9■■□□□ 1.1
NME3-210ENST00000567271 ARHGAP6O43182 974 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 AP1G1O43747 822 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 PIGNO95427 931 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 ZFXP17010 805 aaPredicted RBP21.89■■□□□ 1.09
NME3-210ENST00000567271 CCNCP24863 283 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 HSPA9P38646 679 aaKnown RBP21.89■■□□□ 1.09
NME3-210ENST00000567271 MARCKSL1P49006 195 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 AFF3P51826 1226 aaKnown RBP21.89■■□□□ 1.09
NME3-210ENST00000567271 LIMK1P53667 647 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 ZNF235Q14590 738 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 MARC1Q5VT66 337 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 SPOCD1Q6ZMY3 1216 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 PRPF39Q86UA1 669 aaKnown RBP21.89■■□□□ 1.09
NME3-210ENST00000567271 RFX6Q8HWS3 928 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 RCOR2Q8IZ40 523 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 BBS5Q8N3I7 341 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 PGBD5Q8N414 524 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 TEX26Q8N6G2 289 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 LRRC57Q8N9N7 239 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 HCAR2Q8TDS4 363 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 KRT35Q92764 455 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 ZNF641Q96N77 438 aaPredicted RBP21.89■■□□□ 1.09
NME3-210ENST00000567271 TUBGCP5Q96RT8 1024 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 SUV39H2Q9H5I1 410 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 TRIM10Q9UDY6 481 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 SPTBN4Q9H254 2564 aa21.89■■□□□ 1.09
NME3-210ENST00000567271 A0A1W2PQU0 124 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 MACROD2A1Z1Q3 448 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 GRID2IPA4D2P6 1211 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 ARHGAP33O14559 1287 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 CDX4O14627 284 aaPredicted RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 MATN3O15232 486 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 PCDH8O95206 1070 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 ZRANB2O95218 330 aaKnown RBP eCLIP21.88■■□□□ 1.097e-7■■■■□ 23.2
NME3-210ENST00000567271 SDHBP21912 280 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 MAT2AP31153 395 aaKnown RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 CTNNA1P35221 906 aaKnown RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 NUDT1P36639 197 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 ABL2P42684 1182 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 MMP13P45452 471 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 SCNN1BP51168 640 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 RACK1P63244 317 aaKnown RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 HNRNPDQ14103 355 aaKnown RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 STPG1Q5TH74 334 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 TIGD7Q6NT04 549 aaPredicted RBP21.88■■□□□ 1.09
NME3-210ENST00000567271 TTC7BQ86TV6 843 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 HORMAD1Q86X24 394 aa21.88■■□□□ 1.09
NME3-210ENST00000567271 CAMK1DQ8IU85 385 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms