RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 FAM107AO95990 144 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 ATXN1LP0C7T5 689 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 EPHA5P54756 1037 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 SLC18A2Q05940 514 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 GPM6BQ13491 265 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 SEPT6Q14141 434 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 GALNT3Q14435 633 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 PKN3Q6P5Z2 889 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 KCNMB4Q86W47 210 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 ST13P5Q8NFI4 369 aaPredicted RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 USP13Q92995 863 aaPredicted RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CHMP6Q96FZ7 201 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 PSKH2Q96QS6 385 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 SLC13A1Q9BZW2 595 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 ARNT2Q9HBZ2 717 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 NKIRAS1Q9NYS0 192 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 VPS28Q9UK41 221 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 RWDD3Q9Y3V2 267 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 LOC285095A0A1B0GVY8 99 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 E2F8A0AVK6 867 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 MAGEB16A2A368 324 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 TCP11X1B4DZS4 312 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 BUD23O43709 281 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 LATS1O95835 1130 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 AVPR1AP37288 418 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CDH18Q13634 790 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 PTPRCAPQ14761 206 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 PTPRRQ15256 657 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 LVRNQ6Q4G3 990 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 MFN1Q8IWA4 741 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 HJURPQ8NCD3 748 aaPredicted RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CDKL2Q92772 493 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 ZNF707Q96C28 371 aaPredicted RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 ZNF599Q96NL3 588 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 TGS1Q96RS0 853 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 VPS45Q9NRW7 570 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 CDH22Q9UJ99 828 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
LINC00562-201ENST00000566385 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 KCTD3Q9Y597 815 aa11.48□□□□□ -0.57
LINC00562-201ENST00000566385 A0A0U1RQS6 177 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 WDR91A4D1P6 747 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 LPXNO60711 386 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 KRT38O76015 456 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 RB1P06400 928 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 ITGA2BP08514 1039 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PDHA1P08559 390 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CR2P20023 1033 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 DRD4P21917 467 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 ARCN1P48444 511 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 STRA8Q7Z7C7 330 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 DENND6AQ8IWF6 608 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PBX4Q9BYU1 374 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PCMTD2Q9NV79 361 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 VPS51Q9UID3 782 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 SMG5Q9UPR3 1016 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 TMCC1O94876 653 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 VIMP08670 466 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 GABRB3P28472 473 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CD70P32970 193 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 SERPINH1P50454 418 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CTBP1Q13363 440 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 ZKSCAN8Q15776 578 aaPredicted RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PPM1JQ5JR12 505 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 PRSS36Q5K4E3 855 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 ALG1LQ6GMV1 187 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CMC1Q7Z7K0 106 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 TMEM25Q86YD3 366 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 FAM111AQ96PZ2 611 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CAB39LQ9H9S4 337 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 TREX1Q9NSU2 369 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 SEPT3Q9UH03 358 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 INTS6Q9UL03 887 aaKnown RBP11.47□□□□□ -0.57
LINC00562-201ENST00000566385 ARHGAP26Q9UNA1 814 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 CHKBQ9Y259 395 aa11.47□□□□□ -0.57
LINC00562-201ENST00000566385 RFXAPO00287 272 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 TPP1O14773 563 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 SERPINF2P08697 491 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 GBP2P32456 591 aaPredicted RBP11.46□□□□□ -0.57
LINC00562-201ENST00000566385 ETV4P43268 484 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 NEK3P51956 506 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 SLC18A1P54219 525 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 HNRNPH2P55795 449 aaKnown RBP11.46□□□□□ -0.57
LINC00562-201ENST00000566385 ERVK-21P61565 698 aa11.46□□□□□ -0.57
LINC00562-201ENST00000566385 CDK18Q07002 472 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms