RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 UGT2B4P06133 528 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 PLEKP08567 350 aaPredicted RBP19.1■□□□□ 0.65
ABCA3-204ENST00000566200 RFC1P35251 1148 aaPredicted RBP19.1■□□□□ 0.65
ABCA3-204ENST00000566200 SOX5P35711 763 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 SGCGQ13326 291 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 KRT31Q15323 416 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 MYLK3Q32MK0 819 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 LRRC73Q5JTD7 316 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 ZCCHC8Q6NZY4 707 aaKnown RBP19.1■□□□□ 0.65
ABCA3-204ENST00000566200 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 NETO2Q8NC67 525 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 DENND6BQ8NEG7 585 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 FAM172AQ8WUF8 416 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 CENPTQ96BT3 561 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 TBC1D31Q96DN5 1066 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 KLHL32Q96NJ5 620 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 DEPDC7Q96QD5 511 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 KLC2Q9H0B6 622 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 TCEAL2Q9H3H9 227 aaPredicted RBP19.1■□□□□ 0.65
ABCA3-204ENST00000566200 RETREG1Q9H6L5 497 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 USP29Q9HBJ7 922 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 FAM207AQ9NSI2 230 aaPredicted RBP19.1■□□□□ 0.65
ABCA3-204ENST00000566200 SIK3Q9Y2K2 1263 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 LRRK1Q38SD2 2015 aa19.1■□□□□ 0.65
ABCA3-204ENST00000566200 EIF4E1BA6NMX2 242 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 CASC3O15234 703 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 AQP9O43315 295 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 KDELR3O43731 214 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 RAMP2O60895 175 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 USP12O75317 370 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 DXOO77932 396 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 POP4O95707 220 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 JUNDP17535 347 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 ITIH2P19823 946 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 TGM2P21980 687 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 IGFALSP35858 605 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 GSCP56915 257 aaPredicted RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 GEMIN4P57678 1058 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 SNRPD1P62314 119 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 POLD3Q15054 466 aaPredicted RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 CDKN3Q16667 212 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 DEFB133Q30KQ1 61 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 CT47A1Q5JQC4 288 aaPredicted RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 GUSBP11Q6P575 273 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 RBFAQ8N0V3 343 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 PYROXD2Q8N2H3 581 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 ENOX1Q8TC92 643 aaKnown RBP19.09■□□□□ 0.65
ABCA3-204ENST00000566200 NTAN1Q96AB6 310 aa19.09■□□□□ 0.65
ABCA3-204ENST00000566200 H3BM21 787 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 NEMP1O14524 444 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 TMCC1O94876 653 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 DUSP3P51452 185 aaPredicted RBP19.08■□□□□ 0.64
ABCA3-204ENST00000566200 GABREP78334 506 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 WDR59Q6PJI9 974 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 PCSK4Q6UW60 755 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 GDPD4Q6W3E5 623 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 MAPK15Q8TD08 544 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 LMX1AQ8TE12 382 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 SLC39A7Q92504 469 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 ZNF578Q96N58 590 aaPredicted RBP19.08■□□□□ 0.64
ABCA3-204ENST00000566200 OSBPL1AQ9BXW6 950 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 ASCL3Q9NQ33 180 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 MBNL1Q9NR56 388 aaKnown RBP19.08■□□□□ 0.64
ABCA3-204ENST00000566200 IPO11Q9UI26 975 aaKnown RBP19.08■□□□□ 0.64
ABCA3-204ENST00000566200 SALL4Q9UJQ4 1053 aa19.08■□□□□ 0.64
ABCA3-204ENST00000566200 TCRBV5S1A1TA0A578 114 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 EME2A4GXA9 379 aaPredicted RBP19.07■□□□□ 0.64
ABCA3-204ENST00000566200 GCATO75600 419 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 KRT3P12035 628 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 LSSP48449 732 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 CLEC16AQ2KHT3 1053 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 ISXQ2M1V0 245 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 TRIM72Q6ZMU5 477 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 EFL1Q7Z2Z2 1120 aaKnown RBP19.07■□□□□ 0.64
ABCA3-204ENST00000566200 GPR155Q7Z3F1 870 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 PHF13Q86YI8 300 aaPredicted RBP19.07■□□□□ 0.64
ABCA3-204ENST00000566200 RTL3Q8N8U3 475 aaKnown RBP19.07■□□□□ 0.64
ABCA3-204ENST00000566200 NAF1Q96HR8 494 aaKnown RBP19.07■□□□□ 0.64
ABCA3-204ENST00000566200 LGMNQ99538 433 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 TTYH3Q9C0H2 523 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 ABCG4Q9H172 646 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 POLR1BQ9H9Y6 1135 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 ADAM22Q9P0K1 906 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 HPCAL4Q9UM19 191 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 LRP4O75096 1905 aa19.07■□□□□ 0.64
ABCA3-204ENST00000566200 MGAQ8IWI9 3026 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 CPED1A4D0V7 1026 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 TK2O00142 265 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 TPP1O14773 563 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 BUB1O43683 1085 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 MMP20O60882 483 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 GPD1P21695 349 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 PCBP4P57723 403 aaKnown RBP19.06■□□□□ 0.64
ABCA3-204ENST00000566200 C1orf61Q13536 156 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 PERM1Q5SV97 790 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 CRTC1Q6UUV9 634 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 TTC7BQ86TV6 843 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 VPS36Q86VN1 386 aa19.06■□□□□ 0.64
ABCA3-204ENST00000566200 PHACTR4Q8IZ21 702 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms