RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SP110Q9HB58 689 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 SLCO1B1Q9Y6L6 691 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 NEMP2A6NFY4 417 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 FPGTO14772 594 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 PRAMEF11O60813 436 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 DKK1O94907 266 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 WNT1P04628 370 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 THEGLP0DJG4 465 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 MIPP30301 263 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 HNRNPH3P31942 346 aaKnown RBP16.97■□□□□ 0.31
USB1-211ENST00000565662 METAP1P53582 386 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 OGDHQ02218 1023 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 RAB6CQ53S08 254 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 PYROXD2Q8N2H3 581 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 CAMK1GQ96NX5 476 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 DUSP23Q9BVJ7 150 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 RAB6CQ9H0N0 254 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 USP29Q9HBJ7 922 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 KLHL11Q9NVR0 708 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 NCKIPSDQ9NZQ3 722 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 UVRAGQ9P2Y5 699 aa16.97■□□□□ 0.31
USB1-211ENST00000565662 MYO1FO00160 1098 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 SLC31A1O15431 190 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 ATMINO43313 823 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 UGT2B4P06133 528 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 SERPINA4P29622 427 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 HNF1BP35680 557 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 HNRNPKP61978 463 aaKnown RBP eCLIP16.96■□□□□ 0.31
USB1-211ENST00000565662 POLR2LP62875 67 aaKnown RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 IL10RBQ08334 325 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 NSUN2Q08J23 767 aaKnown RBP eCLIP16.96■□□□□ 0.31
USB1-211ENST00000565662 PTK2BQ14289 1009 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 PPP6R3Q5H9R7 873 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 RALGPS1Q5JS13 557 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 ERAP2Q6P179 960 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 LAYNQ6UX15 382 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 KDF1Q8NAX2 398 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 CXorf40AQ8TE69 158 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 DEF6Q9H4E7 631 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 NOL6Q9H6R4 1146 aaKnown RBP16.96■□□□□ 0.31
USB1-211ENST00000565662 ATP13A3Q9H7F0 1226 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 KCTD5Q9NXV2 234 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 IFNKQ9P0W0 207 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.31
USB1-211ENST00000565662 SSU72P8A0A1W2PR75 194 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 CFAP69A5D8W1 941 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 PLK4O00444 970 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 ENC1O14682 589 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 LDOC1O95751 146 aaPredicted RBP16.95■□□□□ 0.3
USB1-211ENST00000565662 GYPCP04921 128 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 ERCC2P18074 760 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 YPEL5P62699 121 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 TMCO3Q6UWJ1 677 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 ATL2Q8NHH9 583 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 BTN2A2Q8WVV5 523 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 CTNNBL1Q8WYA6 563 aaPredicted RBP16.95■□□□□ 0.3
USB1-211ENST00000565662 GATA6Q92908 595 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 TBATAQ96M53 351 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 KLHL32Q96NJ5 620 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 C1QTNF2Q9BXJ5 285 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 PDFQ9HBH1 243 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 SEPT3Q9UH03 358 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 PCSK1NQ9UHG2 260 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 ANAPC7Q9UJX3 599 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 KNL1Q8NG31 2342 aa16.95■□□□□ 0.3
USB1-211ENST00000565662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 TSPAN11A1L157 253 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 AREL1O15033 823 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 RFPL3O75679 317 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 PALMO75781 387 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 TM7SF2O76062 418 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 CYP1A2P05177 515 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 H2AFZP0C0S5 128 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 SKILP12757 684 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 AP1S1P61966 158 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 FAM193AP78312 1265 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 KCNT1Q5JUK3 1230 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 AFMIDQ63HM1 303 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 H2AFVQ71UI9 128 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 TMPRSS7Q7RTY8 843 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 PTAR1Q7Z6K3 402 aaPredicted RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 TTC7BQ86TV6 843 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 PARGQ86W56 976 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 TMPRSS12Q86WS5 348 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 MAP7D3Q8IWC1 876 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 CNDP2Q96KP4 475 aaKnown RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 KCTD15Q96SI1 283 aaPredicted RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 NUP85Q9BW27 656 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 CALN1Q9BXU9 219 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 TSPY26PQ9H489 355 aa16.94■□□□□ 0.3
USB1-211ENST00000565662 GPR27Q9NS67 375 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms