RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 TRHDEQ9UKU6 1024 aa12.92□□□□□ -0.34
CFDP1-205ENST00000565646 RALGAPA1Q6GYQ0 2036 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 OPHN1O60890 802 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 CTSLP07711 333 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 ZSCAN5DPP0CG00 497 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 HOXB2P14652 356 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 NFKB1P19838 968 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 GKP32189 559 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 HSPA9P38646 679 aaKnown RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 COPAP53621 1224 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SNRPD1P62314 119 aaKnown RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 CKAP4Q07065 602 aaKnown RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 MTAPQ13126 283 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 CRY1Q16526 586 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 MYLK3Q32MK0 819 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 EOGTQ5NDL2 527 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SRLQ86TD4 932 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 PRPF39Q86UA1 669 aaKnown RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 KLHL7Q8IXQ5 586 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 GDAP1L1Q96MZ0 367 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 NUDCD1Q96RS6 583 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 HECAQ9UBI9 543 aaPredicted RBP12.91□□□□□ -0.34
CFDP1-205ENST00000565646 SLC8A2Q9UPR5 921 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
CFDP1-205ENST00000565646 BNIP3LO60238 219 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 METTL18O95568 372 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 POP4O95707 220 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 IGSF6O95976 241 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 IFNB1P01574 187 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 PSMB4P28070 264 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 RPL22P35268 128 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SCNN1BP51168 640 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 METAP1P53582 386 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SDE2Q6IQ49 451 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 KLHDC8BQ8IXV7 354 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 BBS5Q8N3I7 341 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SPEM1Q8N4L4 309 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SPATA22Q8NHS9 363 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 IMP4Q96G21 291 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 KRT12Q99456 494 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 CPEB1Q9BZB8 566 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 MKRN2Q9H000 416 aaKnown RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SLC25A51Q9H1U9 297 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 RSPH9Q9H1X1 276 aaPredicted RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 GBA3Q9H227 469 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 PCDH9Q9HC56 1237 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 KLHL8Q9P2G9 620 aaPredicted RBP12.9□□□□□ -0.34
CFDP1-205ENST00000565646 SARDHQ9UL12 918 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 DOCK9Q9BZ29 2069 aa12.9□□□□□ -0.34
CFDP1-205ENST00000565646 FRYLO94915 3013 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 F5H423 210 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ALOX15BO15296 676 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SYNCRIPO60506 623 aaKnown RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ATG13O75143 517 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 NEBLO76041 1014 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 MAGEA9P43362 315 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 RECQLP46063 649 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 AP1S1P61966 158 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SKOR1P84550 965 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SATB1Q01826 763 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 LMNB2Q03252 620 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ITKQ08881 620 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 STARD3Q14849 445 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 TRIP13Q15645 432 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 RSPO4Q2I0M5 234 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 P3H1Q32P28 736 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 MAML2Q8IZL2 1156 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SUMF1Q8NBK3 374 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 LRRN4CLQ8ND94 238 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 OR8D1Q8WZ84 308 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 RBM15Q96T37 977 aaKnown RBP eCLIP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 FERMT1Q9BQL6 677 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 HEPHQ9BQS7 1158 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 MLPHQ9BV36 600 aaPredicted RBP12.89□□□□□ -0.35
CFDP1-205ENST00000565646 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SLC6A17Q9H1V8 727 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
CFDP1-205ENST00000565646 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms