RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TPI1P60174 286 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 SGCGQ13326 291 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
CLN6-206ENST00000565471 GDPD4Q6W3E5 623 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 PTAR1Q7Z6K3 402 aaPredicted RBP20.16■□□□□ 0.82
CLN6-206ENST00000565471 MARCH9Q86YJ5 346 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 DENND6BQ8NEG7 585 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 OR4C6Q8NH72 309 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 FNIP1Q8TF40 1166 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 KLHL32Q96NJ5 620 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 KLF6Q99612 283 aaPredicted RBP20.16■□□□□ 0.82
CLN6-206ENST00000565471 EDEM3Q9BZQ6 932 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 KLC2Q9H0B6 622 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 HAUS4Q9H6D7 363 aa20.16■□□□□ 0.82
CLN6-206ENST00000565471 POM121BA6NF01 834 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 IGLON5A6NGN9 336 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 TMCO5BA8MYB1 307 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 TRIM38O00635 465 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 NEMP1O14524 444 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 RAD51BO15315 384 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 SPINT1O43278 529 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 SIGLEC6O43699 453 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 PIAS2O75928 621 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 RABIFP47224 123 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 RHOAP61586 193 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 ZNF571Q7Z3V5 609 aaPredicted RBP20.15■□□□□ 0.82
CLN6-206ENST00000565471 FUCA2Q9BTY2 467 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 LRRC19Q9H756 370 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 UCKL1Q9NWZ5 548 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 DKK3Q9UBP4 350 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 AP4E1Q9UPM8 1137 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 GOLGA4Q13439 2230 aaKnown RBP20.15■□□□□ 0.82
CLN6-206ENST00000565471 CHD6Q8TD26 2715 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 ZZEF1O43149 2961 aa20.15■□□□□ 0.82
CLN6-206ENST00000565471 PKD1L2Q7Z442 2459 aa20.14■□□□□ 0.82
CLN6-206ENST00000565471 SPTY2D1-AS1A0A0U1RR47 76 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 TMEM191CA6NGB0 347 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 FPGTO14772 594 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 ATMINO43313 823 aaPredicted RBP20.14■□□□□ 0.81
CLN6-206ENST00000565471 JUPP14923 745 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 NDST2P52849 883 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 FZD2Q14332 565 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 IQCB1Q15051 598 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 E4F1Q66K89 784 aaPredicted RBP20.14■□□□□ 0.81
CLN6-206ENST00000565471 NAP1L5Q96NT1 182 aaPredicted RBP20.14■□□□□ 0.81
CLN6-206ENST00000565471 CPEB1Q9BZB8 566 aaKnown RBP20.14■□□□□ 0.81
CLN6-206ENST00000565471 PDFQ9HBH1 243 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 LHX3Q9UBR4 397 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 UBA2Q9UBT2 640 aaPredicted RBP20.14■□□□□ 0.81
CLN6-206ENST00000565471 GGT7Q9UJ14 662 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 ITM2BQ9Y287 266 aa20.14■□□□□ 0.81
CLN6-206ENST00000565471 DMXL2Q8TDJ6 3036 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 RNF8O76064 485 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 FTLP02792 175 aaPredicted RBP20.13■□□□□ 0.81
CLN6-206ENST00000565471 SUOXP51687 545 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLN6-206ENST00000565471 KLHL30Q0D2K2 578 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 NR1I3Q14994 352 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 FIGNQ5HY92 759 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 ERMARDQ5T6L9 678 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 HES3Q5TGS1 186 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 TTC7BQ86TV6 843 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 PARGQ86W56 976 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 CACTIN-AS1Q8N1I8 211 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 ARFGAP1Q8N6T3 406 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 HCAR2Q8TDS4 363 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 RFFLQ8WZ73 363 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 SNRNP25Q9BV90 132 aaKnown RBP20.13■□□□□ 0.81
CLN6-206ENST00000565471 DHX35Q9H5Z1 703 aaKnown RBP20.13■□□□□ 0.81
CLN6-206ENST00000565471 GPATCH2LQ9NWQ4 482 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 DNAJC28Q9NX36 388 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 NLGN3Q9NZ94 848 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 SCINQ9Y6U3 715 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 FAM208BQ5VWN6 2430 aa20.13■□□□□ 0.81
CLN6-206ENST00000565471 NEMP2A6NFY4 417 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 EEF2KO00418 725 aaKnown RBP20.12■□□□□ 0.81
CLN6-206ENST00000565471 DDX3XO00571 662 aaKnown RBP eCLIP20.12■□□□□ 0.812e-13■■■□□ 16.8
CLN6-206ENST00000565471 CSF2P04141 144 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 GIMD1P0DJR0 217 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 ALPPL2P10696 532 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 NME1P15531 152 aaKnown RBP20.12■□□□□ 0.81
CLN6-206ENST00000565471 ZNF135P52742 658 aaPredicted RBP20.12■□□□□ 0.81
CLN6-206ENST00000565471 PFN3P60673 137 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 CYP4F3Q08477 520 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 GRM3Q14832 879 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 CYTH1Q15438 398 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 CA9Q16790 459 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 DNAAF5Q86Y56 855 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 PSTKQ8IV42 348 aaKnown RBP20.12■□□□□ 0.81
CLN6-206ENST00000565471 CENPTQ96BT3 561 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 TRIM11Q96F44 468 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 PEBP4Q96S96 227 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 NCAPGQ9BPX3 1015 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 CNOT8Q9UFF9 292 aaKnown RBP20.12■□□□□ 0.81
CLN6-206ENST00000565471 GPSM3Q9Y4H4 160 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 ZFHX4Q86UP3 3567 aa20.12■□□□□ 0.81
CLN6-206ENST00000565471 FREM2Q5SZK8 3169 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 KNTC1P50748 2209 aa20.11■□□□□ 0.81
CLN6-206ENST00000565471 TSPAN11A1L157 253 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms