RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 C11orf74Q86VG3 221 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 TEX26Q8N6G2 289 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 QKIQ96PU8 341 aaKnown RBP eCLIP26.32■■□□□ 1.8
NME3-208ENST00000565379 PSKH2Q96QS6 385 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 LGMNQ99538 433 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 CINPQ9BW66 212 aaPredicted RBP26.32■■□□□ 1.8
NME3-208ENST00000565379 TMEM74BQ9NUR3 256 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 CYP8B1Q9UNU6 501 aa26.32■■□□□ 1.8
NME3-208ENST00000565379 FCF1Q9Y324 198 aaKnown RBP26.32■■□□□ 1.8
NME3-208ENST00000565379 MUC22E2RYF6 1773 aaPredicted RBP26.31■■□□□ 1.8
NME3-208ENST00000565379 LNP1A1A4G5 178 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 H7C0C1 242 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 K7ERQ8 282 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 SMAD6O43541 496 aaKnown RBP26.31■■□□□ 1.8
NME3-208ENST00000565379 CCNB1P14635 433 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 KCNA4P22459 653 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 ATP5OP48047 213 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 RHOAP61586 193 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 IFI35P80217 286 aaPredicted RBP26.31■■□□□ 1.8
NME3-208ENST00000565379 ELAVL3Q14576 367 aaKnown RBP26.31■■□□□ 1.8
NME3-208ENST00000565379 ZNF235Q14590 738 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 CYTH1Q15438 398 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 SLC45A4Q5BKX6 768 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 C9orf64Q5T6V5 341 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 LEKR1Q6ZMV7 388 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 LPCAT2Q7L5N7 544 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 ZC3H18Q86VM9 953 aaKnown RBP26.31■■□□□ 1.8
NME3-208ENST00000565379 PTPRN2Q92932 1015 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 MRGPRX1Q96LB2 322 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 VAT1Q99536 393 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 EDEM2Q9BV94 578 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 PRSS16Q9NQE7 514 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 CHD8Q9HCK8 2581 aa26.31■■□□□ 1.8
NME3-208ENST00000565379 KMT2BQ9UMN6 2715 aaPredicted RBP26.3■■□□□ 1.8
NME3-208ENST00000565379 IGHV1OR15-9A0A0B4J2B8 117 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 NEBLO76041 1014 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 RBP3P10745 1247 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 HLA-EP13747 358 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 MMP13P45452 471 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 CSNK1DP48730 415 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 CARD16Q5EG05 197 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 KIAA1324Q6UXG2 1013 aaKnown RBP26.3■■□□□ 1.8
NME3-208ENST00000565379 DSG4Q86SJ6 1040 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 OR2AP1Q8NGE2 309 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 OR2T3Q8NH03 318 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 COG1Q8WTW3 980 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 GDAP1L1Q96MZ0 367 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 FSCN3Q9NQT6 498 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 ACTL7AQ9Y615 435 aa26.3■■□□□ 1.8
NME3-208ENST00000565379 NYNRINQ9P2P1 1898 aaKnown RBP26.3■■□□□ 1.8
NME3-208ENST00000565379 PI4KAP42356 2102 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 TCRBV7S2A1N4TA0A589 114 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 CFAP69A5D8W1 941 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 RNASEH1O60930 286 aaKnown RBP26.29■■□□□ 1.8
NME3-208ENST00000565379 ZNF821O75541 412 aaPredicted RBP26.29■■□□□ 1.8
NME3-208ENST00000565379 IGSF6O95976 241 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 C7P10643 843 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 CES1P23141 567 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 ITPKAP23677 461 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 MAPK8P45983 427 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 RAD51Q06609 339 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 SLC10A7Q0GE19 358 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 CCNG2Q16589 344 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 RALGPS1Q5JS13 557 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 DRICH1Q6PGQ1 229 aaPredicted RBP26.29■■□□□ 1.8
NME3-208ENST00000565379 Q6ZVU0 165 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 CACUL1Q86Y37 369 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 OR8D1Q8WZ84 308 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 LRIG1Q96JA1 1093 aa26.29■■□□□ 1.8
NME3-208ENST00000565379 MKRN2Q9H000 416 aaKnown RBP26.29■■□□□ 1.8
NME3-208ENST00000565379 SIN3BO75182 1162 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 KRT37O76014 449 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 DEKP35659 375 aaKnown RBP26.28■■□□□ 1.8
NME3-208ENST00000565379 IRX4P78413 519 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 RPL6Q02878 288 aaKnown RBP26.28■■□□□ 1.8
NME3-208ENST00000565379 GRM3Q14832 879 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 DARS2Q6PI48 645 aaKnown RBP26.28■■□□□ 1.8
NME3-208ENST00000565379 ZNF366Q8N895 744 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 OR2A12Q8NGT7 310 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 SLC35B2Q8TB61 432 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 HTR3CQ8WXA8 447 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 IL12RB2Q99665 862 aa26.28■■□□□ 1.8
NME3-208ENST00000565379 RBM22Q9NW64 420 aaKnown RBP eCLIP26.28■■□□□ 1.8
NME3-208ENST00000565379 MAP1BP46821 2468 aaKnown RBP26.28■■□□□ 1.8
NME3-208ENST00000565379 CEP192Q8TEP8 1941 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 CKAP5Q14008 2032 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 GOLGA6L10A0A0M3HER8 536 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 C4orf47A7E2U8 309 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 STK10O94804 968 aaKnown RBP26.27■■□□□ 1.8
NME3-208ENST00000565379 POP4O95707 220 aaKnown RBP26.27■■□□□ 1.8
NME3-208ENST00000565379 PAFAH1B1P43034 410 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 ZBTB16Q05516 673 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 N4BP2L1Q5TBK1 243 aaPredicted RBP26.27■■□□□ 1.8
NME3-208ENST00000565379 LYSMD4Q5XG99 296 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 ADAT2Q7Z6V5 191 aaKnown RBP26.27■■□□□ 1.8
NME3-208ENST00000565379 SLC41A1Q8IVJ1 513 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 MGME1Q9BQP7 344 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 RSPH9Q9H1X1 276 aaPredicted RBP26.27■■□□□ 1.8
NME3-208ENST00000565379 LHX3Q9UBR4 397 aa26.27■■□□□ 1.8
NME3-208ENST00000565379 R3HDM2Q9Y2K5 976 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms