RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ALPPL2P10696 532 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ITIH2P19823 946 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 TGM2P21980 687 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 SDC4P31431 198 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ACTN2P35609 894 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ETFBP38117 255 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 LSSP48449 732 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 GSCP56915 257 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 GEMIN4P57678 1058 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 POLR2FP61218 127 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 SGCGQ13326 291 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 PDE1CQ14123 709 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 POLD3Q15054 466 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ARL13BQ3SXY8 428 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 HS1BP3Q53T59 392 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ATXN7L2Q5T6C5 722 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 RWDD4Q6NW29 188 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ZCCHC8Q6NZY4 707 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 WDR59Q6PJI9 974 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 PCSK4Q6UW60 755 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 ZSCAN30Q86W11 494 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 SPACA3Q8IXA5 215 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 PYROXD2Q8N2H3 581 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 NETO2Q8NC67 525 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 FAM172AQ8WUF8 416 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 BAP1Q92560 729 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 NTAN1Q96AB6 310 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 RAB7BQ96AH8 199 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 KLHL32Q96NJ5 620 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 FCRL3Q96P31 734 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 C11orf70Q9BRQ4 267 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 BOCQ9BWV1 1114 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 KLC2Q9H0B6 622 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 NUP62CLQ9H1M0 184 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 TCEAL2Q9H3H9 227 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 USP29Q9HBJ7 922 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 NLRC4Q9NPP4 1024 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 FAM207AQ9NSI2 230 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 SETXQ7Z333 2677 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 SHROOM3Q8TF72 1996 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 EME2A4GXA9 379 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 SIGLEC16A6NMB1 481 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TPP1O14773 563 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 ATXN7O15265 892 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 AQP9O43315 295 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 USP12O75317 370 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 CSO75390 466 aaKnown RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 MPOP05164 745 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 UGT2B4P06133 528 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 KRT3P12035 628 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TIMP2P16035 220 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 JUNDP17535 347 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 DUSP3P51452 185 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 SNRPD1P62314 119 aaKnown RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 CCDC173Q0VFZ6 552 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 INO80DQ53TQ3 878 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 GUSBP11Q6P575 273 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 GDPD4Q6W3E5 623 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TRIM72Q6ZMU5 477 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TTC7BQ86TV6 843 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 PHF13Q86YI8 300 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 RBFAQ8N0V3 343 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 RYBPQ8N488 228 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 RTL3Q8N8U3 475 aaKnown RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 IFI44Q8TCB0 444 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TBC1D31Q96DN5 1066 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF578Q96N58 590 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 OSBPL1AQ9BXW6 950 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 TTYH3Q9C0H2 523 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 CLPBQ9H078 707 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 POLR1BQ9H9Y6 1135 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 ASCL3Q9NQ33 180 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 MBNL1Q9NR56 388 aaKnown RBP8.7□□□□□ -1.02
CAPN3-213ENST00000565173 LMBRD1Q9NUN5 540 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 FANCLQ9NW38 375 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 ADAM22Q9P0K1 906 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 SALL4Q9UJQ4 1053 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 HPCAL4Q9UM19 191 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 MFHAS1Q9Y4C4 1052 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 BOD1L1Q8NFC6 3051 aa8.7□□□□□ -1.02
CAPN3-213ENST00000565173 LRRC10BA6NIK2 292 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 WASH4PA8MWX3 477 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 LMO7DNF2Z398 122 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 H3BM21 787 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 INSIG1O15503 277 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 BUB1O43683 1085 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 MMP20O60882 483 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 TMCC1O94876 653 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 GPD1P21695 349 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 IGFALSP35858 605 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 STAT1P42224 750 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 ERVPABLB-1P60509 514 aa8.69□□□□□ -1.02
CAPN3-213ENST00000565173 RPL7AP62424 266 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms