RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 GPR27Q9NS67 375 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 KLHL11Q9NVR0 708 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 UCKL1Q9NWZ5 548 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 LHX3Q9UBR4 397 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 PCDHGA1Q9Y5H4 931 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 APC2O95996 2303 aa10.18□□□□□ -0.78
CMTM3-209ENST00000565003 SYCE3A1L190 88 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 IGLON5A6NGN9 336 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 A6NNZ2 444 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 AREL1O15033 823 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 INSIG1O15503 277 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 FGF10O15520 208 aaPredicted RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 TSPAN6O43657 245 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 SIGLEC6O43699 453 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 RFPL3O75679 317 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 PIAS2O75928 621 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 POP4O95707 220 aaKnown RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 IGSF6O95976 241 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 SERPINC1P01008 464 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 SKILP12757 684 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 DESP17661 470 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 DGKAP23743 735 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 MIPP30301 263 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 KLHL30Q0D2K2 578 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 INO80DQ53TQ3 878 aaPredicted RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF542PQ5EBM4 170 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 TPRG1LQ5T0D9 272 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 GDPD4Q6W3E5 623 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 KYAT3Q6YP21 454 aaKnown RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 Q6ZSR6 202 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CASKIN2Q8WXE0 1202 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 RAB7BQ96AH8 199 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF653Q96CK0 615 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CELF6Q96J87 481 aaKnown RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 EXOC2Q96KP1 924 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 KCTD15Q96SI1 283 aaPredicted RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 C1QTNF2Q9BXJ5 285 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 OSBPL1AQ9BXW6 950 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CCDC86Q9H6F5 360 aaKnown RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 LRRC19Q9H756 370 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CBX8Q9HC52 389 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CNOT8Q9UFF9 292 aaKnown RBP10.17□□□□□ -0.78
CMTM3-209ENST00000565003 PCSK1NQ9UHG2 260 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 CHD6Q8TD26 2715 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 ACACAQ13085 2346 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 ZZEF1O43149 2961 aa10.17□□□□□ -0.78
CMTM3-209ENST00000565003 SPTY2D1-AS1A0A0U1RR47 76 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 J3KR12 359 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 EEF2KO00418 725 aaKnown RBP10.16□□□□□ -0.78
CMTM3-209ENST00000565003 NEMP1O14524 444 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 FFAR2O15552 330 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 LRCH4O75427 683 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 PIGNO95427 931 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 C1SP09871 688 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 GIMD1P0DJR0 217 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 GZMAP12544 262 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 CKMT2P17540 419 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 ITIH2P19823 946 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 HTR7P34969 479 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 PBX1P40424 430 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 PFN3P60673 137 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 FZD2Q14332 565 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 CYTH1Q15438 398 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 KLHL40Q2TBA0 621 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 ERMARDQ5T6L9 678 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 HES3Q5TGS1 186 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 AFMIDQ63HM1 303 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 RFX8Q6ZV50 586 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 TTC7BQ86TV6 843 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 ZSCAN30Q86W11 494 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 TMPRSS12Q86WS5 348 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 ARHGAP12Q8IWW6 846 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 NPWQ8N729 165 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 OR4C6Q8NH72 309 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 FNIP1Q8TF40 1166 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 ARHGEF26Q96DR7 871 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 LENG8Q96PV6 779 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-209ENST00000565003 EDEM3Q9BZQ6 932 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 SLC39A8Q9C0K1 460 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 UBA2Q9UBT2 640 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-209ENST00000565003 MFHAS1Q9Y4C4 1052 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 HS3ST3A1Q9Y663 406 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 KNTC1P50748 2209 aa10.16□□□□□ -0.78
CMTM3-209ENST00000565003 TDRD6O60522 2096 aaKnown RBP10.16□□□□□ -0.78
CMTM3-209ENST00000565003 FAM208BQ5VWN6 2430 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 TRABD2BA6NFA1 517 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 EIF3CLB5ME19 914 aaKnown RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 FPGTO14772 594 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 PRPSAP2O60256 369 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 PRAMEF11O60813 436 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 MMP20O60882 483 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 RNF8O76064 485 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 TCF4P15884 667 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 TIMP2P16035 220 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 ERCC2P18074 760 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms