RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NXPE3Q969Y0 559 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 PPP1R2P1Q96PQ5 205 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 FCRL5Q96RD9 977 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 FMO2Q99518 471 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 LTB4R2Q9NPC1 389 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ZDHHC18Q9NUE0 388 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 DEC1Q9P2X7 70 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 MTRF1LQ9UGC7 380 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 SLC25A13Q9UJS0 675 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 SLC27A6Q9Y2P4 619 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ATP8A1Q9Y2Q0 1164 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TCRBV7S3A2A0A539 114 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 CCDC151A5D8V7 595 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GOLGA6CA6NDK9 693 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GOLGA6BA6NDN3 693 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GOLGA8MH3BSY2 632 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SMAPO00193 183 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 MUSKO15146 869 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TP73O15350 636 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TMEM63AO94886 807 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 CD160O95971 181 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 MT-CO1P00395 513 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GOLGA6DP0CG33 693 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TDGF1P13385 188 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TPSB2P20231 275 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 HSPA9P38646 679 aaKnown RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 OPRD1P41143 372 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 CTSOP43234 321 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 MAGEA6P43360 314 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SLC6A11P48066 632 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 ECT2LQ008S8 904 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 CYTH1Q15438 398 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SLC44A4Q53GD3 710 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 METTL3Q86U44 580 aaKnown RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 ADIPOR2Q86V24 386 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 PGBD5Q8N414 524 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 ATP11CQ8NB49 1132 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TSEN2Q8NCE0 465 aaKnown RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 TTC17Q96AE7 1141 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 PSKH2Q96QS6 385 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GORASP1Q9BQQ3 440 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 CIPCQ9C0C6 399 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 SLC25A51Q9H1U9 297 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 EIF2B3Q9NR50 452 aaKnown RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 GOLGA6AQ9NYA3 693 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 FBXO4Q9UKT5 387 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 FCF1Q9Y324 198 aaKnown RBP11.24□□□□□ -0.61
SF3B3-205ENST00000564899 PCDHGA2Q9Y5H1 932 aa11.24□□□□□ -0.61
SF3B3-205ENST00000564899 NUP205Q92621 2012 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 PSMD3O43242 534 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 GDF9O60383 454 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 ANXA9O76027 345 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 ASLP04424 464 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 SRCP12931 536 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 EIF2DP41214 584 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 STK19P49842 368 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 GEMP55040 296 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 RHOAP61586 193 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 DSC2Q02487 901 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 NIPAL4Q0D2K0 466 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 SPEM2Q0P670 501 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 PREPLQ4J6C6 727 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 TMEM215Q68D42 235 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 EMBQ6PCB8 327 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 PPP1R21Q6ZMI0 780 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 SPATA22Q8NHS9 363 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 AENQ8WTP8 325 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 IMP4Q96G21 291 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 OXNAD1Q96HP4 312 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 RPL10LQ96L21 214 aaKnown RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 RBM15Q96T37 977 aaKnown RBP eCLIP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 LRRC40Q9H9A6 602 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 PRMT8Q9NR22 394 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-205ENST00000564899 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 LHX3Q9UBR4 397 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 FAM153AQ9UHL3 310 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
SF3B3-205ENST00000564899 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms