RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SEPT5Q99719 369 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 PLAC1Q9HBJ0 212 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FBXO6Q9NRD1 293 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 GKN1Q9NS71 199 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TMEM45AQ9NWC5 275 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SMIM28A0A1B0GU29 152 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ARL5CA6NH57 179 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TTC36A6NLP5 189 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DNM1LO00429 736 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ARHGEF9O43307 516 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MPZL2O60487 215 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 B4GALT4O60513 344 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CDK4P11802 303 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 YWHAGP61981 247 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-213ENST00000564845 FAM180BQ6P0A1 224 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 C3orf62Q6ZUJ4 267 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ACAD11Q709F0 780 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 EXOC3L1Q86VI1 746 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 LRRC6Q86X45 466 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 LRRC34Q8IZ02 419 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ZNF784Q8NCA9 323 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 RFWD2Q8NHY2 731 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DPF3Q92784 378 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SLITRK1Q96PX8 696 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TXLNGYQ9BZA5 131 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ADAM7Q9H2U9 754 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MTG2Q9H4K7 406 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CATSPERBQ9H7T0 1116 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CHST12Q9NRB3 414 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NCF1BA6NI72 391 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 NCF1CA8MVU1 366 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 TCP11X1B4DZS4 312 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RNF103O00237 685 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NCF1P14598 390 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 S100A5P33763 92 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 AAK1Q2M2I8 961 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PDE12Q6L8Q7 609 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 DEFB106AQ8N104 65 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ZNF276Q8N554 614 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FAR1Q8WVX9 515 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MFSD14AQ96MC6 490 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DEFB118Q96PH6 123 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NDNQ99608 321 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RAB11FIP5Q9BXF6 653 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 OSBPL8Q9BZF1 889 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 UBE2OQ9C0C9 1292 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 PTGESO14684 152 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PTPN3P26045 913 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MAP2K2P36507 400 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 EIF3EP60228 445 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 USP4Q13107 963 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 KRT81Q14533 505 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SPRYD7Q5W111 196 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 CES4AQ5XG92 561 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SHQ1Q6PI26 577 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 CDHR3Q6ZTQ4 885 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PLEKHH3Q7Z736 793 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ABRAQ8N0Z2 381 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RDH11Q8TC12 318 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 WBP2Q969T9 261 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 WDR41Q9HAD4 459 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TIGARQ9NQ88 270 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TRPV5Q9NQA5 729 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PIGVQ9NUD9 493 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 SLC2A6Q9UGQ3 507 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FBXO9Q9UK97 447 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 ASH1LQ9NR48 2969 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 FGF10O15520 208 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 IVDP26440 423 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 GSTT1P30711 240 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NUP62P37198 522 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 LHX1P48742 406 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 SGSHP51688 502 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MRPS35P82673 323 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 FSCN1Q16658 493 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 CERCAMQ5T4B2 595 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 C3P1Q6ZMU1 363 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 FUKQ8N0W3 1084 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 LINC00471Q8N535 108 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 RBM15Q96T37 977 aaKnown RBP eCLIP3.39□□□□□ -1.873e-6■■■□□ 18.1
CHD9-213ENST00000564845 TRAIPQ9BWF2 469 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 GDF3Q9NR23 364 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 STMN3Q9NZ72 180 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 VANGL2Q9ULK5 521 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PTGDR2Q9Y5Y4 395 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 NFASCO94856 1347 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ANK1P16157 1881 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DNAJC25-GNG10A0A024R161 153 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TCRBV5S1A1TA0A578 114 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 PRPF4O43172 522 aaKnown RBP eCLIP3.39□□□□□ -1.871e-6■□□□□ 9.4
CHD9-213ENST00000564845 RIPK2O43353 540 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 ANXA9O76027 345 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 POLBP06746 335 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 MCL1Q07820 350 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 TARBP2Q15633 366 aaKnown RBP3.39□□□□□ -1.87
CHD9-213ENST00000564845 SLC1A5Q15758 541 aa3.39□□□□□ -1.87
CHD9-213ENST00000564845 DGKDQ16760 1214 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms