RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PALMO75781 387 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 AMPD1P23109 780 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 SLC25A11Q02978 314 aaKnown RBP18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 AFMIDQ63HM1 303 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 TMCO3Q6UWJ1 677 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 NAXDQ8IW45 347 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 ARHGAP12Q8IWW6 846 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 MFSD2AQ8NA29 543 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 RAB7BQ96AH8 199 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 CAMK1GQ96NX5 476 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 PDFQ9HBH1 243 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 MFHAS1Q9Y4C4 1052 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 PCDHGB2Q9Y5G2 931 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 FADS3Q9Y5Q0 445 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 H0Y8X5 98 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 TLR4O00206 839 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 NEMP1O14524 444 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 AP1G1O43747 822 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 MAGEC1O60732 1142 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 CCT8P50990 548 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 CDH6P55285 790 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 RPS21P63220 83 aaKnown RBP18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 TBX2Q13207 712 aaPredicted RBP18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 GRM3Q14832 879 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 ZNF423Q2M1K9 1284 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 ZNF284Q2VY69 593 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 KIAA1161Q6NSJ0 714 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 TTC7BQ86TV6 843 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 NPWQ8N729 165 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 EXOC2Q96KP1 924 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 CSPG4P5Q96PW8 444 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 CPEB1Q9BZB8 566 aaKnown RBP18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 PCDH18Q9HCL0 1135 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 GDF3Q9NR23 364 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 SPTLC3Q9NUV7 552 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 LHX3Q9UBR4 397 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 ZFR2Q9UPR6 939 aaKnown RBP18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 TRPM6Q9BX84 2022 aa18.6■□□□□ 0.57
SYNGR3-204ENST00000564642 PCNX2A6NKB5 2137 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 SPAARA0A1B0GVQ0 90 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 FLRT2O43155 660 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 PROSCO94903 275 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 PRLRP16471 622 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 HNRNPA2B1P22626 353 aaKnown RBP18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 AKT2P31751 481 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 GJC1P36383 396 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 IL10RBQ08334 325 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 OVGP1Q12889 678 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 RFTN1Q14699 578 aaPredicted RBP18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 IQCHQ86VS3 1027 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 RHBDD1Q8TEB9 315 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 KLHDC7BQ96G42 594 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 ELF4Q99607 663 aaPredicted RBP18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 MYOCQ99972 504 aa18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 CINPQ9BW66 212 aaPredicted RBP18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 IPO11Q9UI26 975 aaKnown RBP18.59■□□□□ 0.57
SYNGR3-204ENST00000564642 INSIG1O15503 277 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 TSPAN6O43657 245 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 XPAP23025 273 aaPredicted RBP18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SERPINB6P35237 376 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 NXPH1P58417 271 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SIM1P81133 766 aaPredicted RBP18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SGCGQ13326 291 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 MESDQ14696 234 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 TRIP6Q15654 476 aaKnown RBP18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 PRAMEF14Q5SWL7 426 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 ZFYVE27Q5T4F4 411 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SEL1L3Q68CR1 1132 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 DBX2Q6ZNG2 339 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 ARHGAP36Q6ZRI8 547 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 ZSCAN30Q86W11 494 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 KCTD6Q8NC69 237 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SLC35G2Q8TBE7 412 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 SLC17A9Q9BYT1 436 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 RBSNQ9H1K0 784 aa18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 RCOR3Q9P2K3 495 aaPredicted RBP18.58■□□□□ 0.56
SYNGR3-204ENST00000564642 MAP1BP46821 2468 aaKnown RBP18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 A0A1B0GTQ1 180 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 TMEM110-MUSTN1A8MSY1 372 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 PCDHGA12O60330 932 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 PAK4O96013 591 aaPredicted RBP18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 KRT7P08729 469 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 PMLP29590 882 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 ABL2P42684 1182 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 ARRB1P49407 418 aaPredicted RBP18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 IL9RQ01113 521 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 ATP13A4Q4VNC1 1196 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 TMEM259Q4ZIN3 620 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 CFAP58Q5T655 872 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 SRLQ86TD4 932 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 MAP7D3Q8IWC1 876 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 TP53INP2Q8IXH6 220 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 RHOT2Q8IXI1 618 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 OXR1Q8N573 874 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 TSEN2Q8NCE0 465 aaKnown RBP18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 HCAR2Q8TDS4 363 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 CALN1Q9BXU9 219 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 SUV39H2Q9H5I1 410 aa18.57■□□□□ 0.56
SYNGR3-204ENST00000564642 ERVMER34-1Q9H9K5 563 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms