RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 NLGN3Q9NZ94 848 aa15.23■□□□□ 0.03
SPG7-210ENST00000564409 NCKIPSDQ9NZQ3 722 aa15.23■□□□□ 0.03
SPG7-210ENST00000564409 DKK3Q9UBP4 350 aa15.23■□□□□ 0.03
SPG7-210ENST00000564409 FZD10Q9ULW2 581 aa15.23■□□□□ 0.03
SPG7-210ENST00000564409 CSNK1G3Q9Y6M4 447 aa15.23■□□□□ 0.03
SPG7-210ENST00000564409 SPTY2D1-AS1A0A0U1RR47 76 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 H3BM21 787 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 TRIM38O00635 465 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 SDC3O75056 442 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 IGSF6O95976 241 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 CKMT1AP12532 417 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 TNFAIP3P21580 790 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 DUSP3P51452 185 aaPredicted RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 ZNF135P52742 658 aaPredicted RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 CLDN2P57739 230 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 RPL7AP62424 266 aaKnown RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 SERINC3Q13530 473 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 RTP5Q14D33 572 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 FILIP1LQ4L180 1135 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 HES3Q5TGS1 186 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 GDPD4Q6W3E5 623 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 PTAR1Q7Z6K3 402 aaPredicted RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 PARGQ86W56 976 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 SLC22A18ASQ8N1D0 253 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 NOL6Q9H6R4 1146 aaKnown RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 IPO11Q9UI26 975 aaKnown RBP15.22■□□□□ 0.03
SPG7-210ENST00000564409 RAXQ9Y2V3 346 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 FREM2Q5SZK8 3169 aa15.22■□□□□ 0.03
SPG7-210ENST00000564409 DSPP15924 2871 aaKnown RBP15.21■□□□□ 0.03
SPG7-210ENST00000564409 A0A087WV48 116 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 POM121BA6NF01 834 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 IGLON5A6NGN9 336 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 AREL1O15033 823 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 SCAMP1O15126 338 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 CREB3O43889 395 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 TMCC1O94876 653 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 CSF2P04141 144 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 UGT2B4P06133 528 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 GP1BAP07359 652 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 GZMAP12544 262 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 NME1P15531 152 aaKnown RBP15.21■□□□□ 0.03
SPG7-210ENST00000564409 NDST2P52849 883 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 RHOAP61586 193 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 YPEL5P62699 121 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 DAB2P98082 770 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 TARDBPQ13148 414 aaKnown RBP eCLIP15.21■□□□□ 0.03
SPG7-210ENST00000564409 PTK2BQ14289 1009 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 FGL2Q14314 439 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 TMC6Q7Z403 805 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 TTC7BQ86TV6 843 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 PSTKQ8IV42 348 aaKnown RBP15.21■□□□□ 0.03
SPG7-210ENST00000564409 OR6K2Q8NGY2 324 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 BTN2A2Q8WVV5 523 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 TBATAQ96M53 351 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 KLF6Q99612 283 aaPredicted RBP15.21■□□□□ 0.03
SPG7-210ENST00000564409 SYT11Q9BT88 431 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 DNAJC28Q9NX36 388 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 ACTL7AQ9Y615 435 aa15.21■□□□□ 0.03
SPG7-210ENST00000564409 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 RASA4BC9J798 803 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 RASA4O43374 803 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 ATP1A3P13637 1013 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 ABL2P42684 1182 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 TPI1P60174 286 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 ELP6Q0PNE2 266 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 MAMLD1Q13495 774 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 FZD2Q14332 565 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 PLEKHA7Q6IQ23 1121 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 DNAAF5Q86Y56 855 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 MARCH9Q86YJ5 346 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 PYROXD2Q8N2H3 581 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 DCBLD1Q8N8Z6 715 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 FNIP1Q8TF40 1166 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 BAP1Q92560 729 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 CENPTQ96BT3 561 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 HMCESQ96FZ2 354 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 KLHL32Q96NJ5 620 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 UCKL1Q9NWZ5 548 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 AIPL1Q9NZN9 384 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 CLCA2Q9UQC9 943 aa15.2■□□□□ 0.02
SPG7-210ENST00000564409 ARHGAP42A6NI28 874 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 TPP1O14773 563 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 RAD51BO15315 384 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 TM7SF2O76062 418 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 RNF8O76064 485 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 GIMD1P0DJR0 217 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 PFN3P60673 137 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 INSM1Q01101 510 aaPredicted RBP15.19■□□□□ 0.02
SPG7-210ENST00000564409 ANO6Q4KMQ2 910 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 ATXN7L2Q5T6C5 722 aaPredicted RBP15.19■□□□□ 0.02
SPG7-210ENST00000564409 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
SPG7-210ENST00000564409 ZCCHC8Q6NZY4 707 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms