RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 DDR1Q08345 913 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 ILF3Q12906 894 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 DHX34Q14147 1143 aaKnown RBP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 LPIN1Q14693 890 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 ZRSR1Q15695 479 aaKnown RBP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 XKR9Q5GH70 373 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 CCDC174Q6PII3 467 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 MON1AQ86VX9 555 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 SPICE1Q8N0Z3 855 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 GHDCQ8N2G8 530 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 MUC20Q8N307 709 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 PGBD5Q8N414 524 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 RFLNBQ8N5W9 214 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 MCPH1Q8NEM0 835 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 RFWD2Q8NHY2 731 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 SPATA20Q8TB22 786 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 LTV1Q96GA3 475 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 MASTLQ96GX5 879 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 TWSG1Q9GZX9 223 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 SAYSD1Q9NPB0 183 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 DONSONQ9NYP3 566 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 CLDN16Q9Y5I7 305 aa3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 MORC2Q9Y6X9 1032 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P33-201ENST00000563485 SAA2-SAA4A0A096LPE2 208 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 A0A0B4J293 547 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 NPIPB11E5RHQ5 1161 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 STX16-NPEPL1H3BU86 382 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 STX16O14662 325 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 FAM155BO75949 473 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 SERPINC1P01008 464 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 IGLV2-11P01706 119 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 F7P08709 466 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 FMO4P31512 558 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 HNF1BP35680 557 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 ARSFP54793 590 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 DLG1Q12959 904 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 CHAF1AQ13111 956 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 HDAC1Q13547 482 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 SETMARQ53H47 684 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 RHBDF2Q6PJF5 856 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 THAP4Q8WY91 577 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 TRIB2Q92519 343 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 SLC39A13Q96H72 371 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 IL17FQ96PD4 163 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 NODALQ96S42 347 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 YME1L1Q96TA2 773 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 NPLQ9BXD5 320 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 TAGLN3Q9UI15 199 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 CD207Q9UJ71 328 aa3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 ERRFI1Q9UJM3 462 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P33-201ENST00000563485 PRSS47A8MTI9 375 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 VNN2O95498 520 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 TCEA1P23193 301 aaKnown RBP3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 MYF6P23409 242 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 SSTR2P30874 369 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 TTKP33981 857 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 ADD2P35612 726 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 CHKAP35790 457 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 CENPAP49450 140 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 AARSP49588 968 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 PEX5P50542 639 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 GOLGA8FQ08AF8 430 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 ST3GAL1Q11201 340 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 UBE4AQ14139 1066 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 BRD3Q15059 726 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 DCAF6Q58WW2 860 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 CBWD5Q5RIA9 395 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 FAM69BQ5VUD6 431 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 MEX3BQ6ZN04 569 aaKnown RBP3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 ZNF771Q7L3S4 317 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 DENND6AQ8IWF6 608 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 CCDC105Q8IYK2 499 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 AADATQ8N5Z0 425 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 DNAAF1Q8NEP3 725 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 ARRDC2Q8TBH0 407 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 AFG1LQ8WV93 481 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 RILPL2Q969X0 211 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 RNF183Q96D59 192 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 BICD1Q96G01 975 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 SCMH1Q96GD3 660 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 TTC12Q9H892 705 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 OR6C3Q9NZP0 311 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 CNPY2Q9Y2B0 182 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 DERAQ9Y315 318 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 NFS1Q9Y697 457 aa3.43□□□□□ -1.86
HMGB1P33-201ENST00000563485 PRAC2D3DTV9 90 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 BMPR1BO00238 502 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 TULP2O00295 520 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 CLGNO14967 610 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 DHX16O60231 1041 aaKnown RBP3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 TK1P04183 234 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 TNNT1P13805 278 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 POSTNQ15063 836 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 KIF26BQ2KJY2 2108 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 PLEKHO1Q53GL0 409 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 OTUD3Q5T2D3 398 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 CCDC129Q6ZRS4 1044 aa3.42□□□□□ -1.86
HMGB1P33-201ENST00000563485 ANKRD44Q8N8A2 993 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms