RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 NXPE3Q969Y0 559 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 MRGPRX3Q96LB0 322 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 PABPC3Q9H361 631 aaKnown RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 VPS45Q9NRW7 570 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 DEC1Q9P2X7 70 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SLCO3A1Q9UIG8 710 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 CKAP5Q14008 2032 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 PRRT4C9JH25 899 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 RIPK2O43353 540 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 TTC4O95801 387 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 MGAT1P26572 445 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SESN2P58004 480 aaPredicted RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 SLC14A2Q15849 920 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 PTPRNQ16849 979 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 LEXMQ3ZCV2 418 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 KDELC2Q7Z4H8 507 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 SRLQ86TD4 932 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 LINC00523Q86TU6 105 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 MYO19Q96H55 970 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 TM6SF2Q9BZW4 377 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 CHMP2BQ9UQN3 213 aa10.29□□□□□ -0.76
SMG1-208ENST00000563448 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.29□□□□□ -0.76
SMG1-208ENST00000563448 LOC285095A0A1B0GVY8 99 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SERPINF2P08697 491 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CES1P23141 567 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CHRNA4P43681 627 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SOX9P48436 509 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CDH17Q12864 832 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SLC29A2Q14542 456 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CCDC38Q502W7 563 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 DNAJC21Q5F1R6 531 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 C22orf39Q6P5X5 142 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SFTPA1Q8IWL2 248 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 IQCKQ8N0W5 287 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 PYROXD1Q8WU10 500 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 FSD1LQ9BXM9 530 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CIPCQ9C0C6 399 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 TNKS2Q9H2K2 1166 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 KCNK12Q9HB15 430 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 LRRC4CQ9HCJ2 640 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SYBUQ9NX95 663 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ZNF106Q9H2Y7 1883 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 LRRK1Q38SD2 2015 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 XIRP2A4UGR9 3374 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SDR42E2A6NKP2 422 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ATP8B1O43520 1251 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ATP9BO43861 1147 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ACSL3O95573 720 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ASLP04424 464 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SRPRAP08240 638 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 TPH1P17752 444 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 EIF2DP41214 584 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 CSNK1DP48730 415 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 NPY2RP49146 381 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 GPX6P59796 221 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CRADDP78560 199 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CDK18Q07002 472 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 DLG2Q15700 870 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ACCSLQ4AC99 568 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 RALGPS1Q5JS13 557 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 CERCAMQ5T4B2 595 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 PTCRAQ6ISU1 281 aaPredicted RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 SLC44A3Q8N4M1 653 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 SLC25A41Q8N5S1 370 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 TERB1Q8NA31 727 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 OR2AP1Q8NGE2 309 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 UHMK1Q8TAS1 419 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ZBTB9Q96C00 473 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 LRRC39Q96DD0 335 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 FEM1CQ96JP0 617 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 TRIB3Q96RU7 358 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 EBNA1BP2Q99848 306 aaKnown RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 CEP44Q9C0F1 390 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 VIPAS39Q9H9C1 493 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 PLAC1Q9HBJ0 212 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ARNT2Q9HBZ2 717 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 ELOVL2Q9NXB9 296 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 EVLQ9UI08 416 aaPredicted RBP10.28□□□□□ -0.76
SMG1-208ENST00000563448 PLAAQ9Y263 795 aa10.28□□□□□ -0.76
SMG1-208ENST00000563448 EYSQ5T1H1 3165 aa10.27□□□□□ -0.76
SMG1-208ENST00000563448 ANTXRLA6NF34 631 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 TTC34A8MYJ7 566 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 IGSF6O95976 241 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 GSRP00390 522 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 ATP5BP06576 529 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 DLDP09622 509 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 ATXN1LP0C7T5 689 aaKnown RBP10.27□□□□□ -0.77
SMG1-208ENST00000563448 SSTR1P30872 391 aa10.27□□□□□ -0.77
SMG1-208ENST00000563448 GKP32189 559 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms