RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RBFAQ8N0V3 343 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 RYBPQ8N488 228 aaPredicted RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 CCDC185Q8N715 623 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 LSM14AQ8ND56 463 aaKnown RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 OR2AP1Q8NGE2 309 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 LMX1AQ8TE12 382 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ASB12Q8WXK4 309 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 CENPTQ96BT3 561 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 ABCG4Q9H172 646 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 POLR1BQ9H9Y6 1135 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 TMEM248Q9NWD8 314 aa17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
HDGFL3-203ENST00000563404 C2CD4BA6NLJ0 364 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 H3BM21 787 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 KRIT1O00522 736 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 PES1O00541 588 aaKnown RBP17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 AREL1O15033 823 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 GCATO75600 419 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 GFPT2O94808 682 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 LRIG2O94898 1065 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 GSRP00390 522 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 ITIH2P19823 946 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 MAPKAPK2P49137 400 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 HDAC4P56524 1084 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 PTP4A2Q12974 167 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 ISXQ2M1V0 245 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 PERM1Q5SV97 790 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 CRTC1Q6UUV9 634 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 EFL1Q7Z2Z2 1120 aaKnown RBP17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF843Q8N446 348 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 NETO2Q8NC67 525 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 MSANTD4Q8NCY6 345 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 CENPIQ92674 756 aaPredicted RBP17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 RAB7BQ96AH8 199 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 KLHL32Q96NJ5 620 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 NOL6Q9H6R4 1146 aaKnown RBP17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 CPNE5Q9HCH3 593 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 SALL4Q9UJQ4 1053 aa17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 SETXQ7Z333 2677 aaKnown RBP17.05■□□□□ 0.32
HDGFL3-203ENST00000563404 CPED1A4D0V7 1026 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 PMS2P1A4D2B8 440 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 EME2A4GXA9 379 aaPredicted RBP17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 NEMP1O14524 444 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 SDC4P31431 198 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 IGFALSP35858 605 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 ERVPABLB-1P60509 514 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 CDR2Q01850 454 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 C1orf61Q13536 156 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF677Q86XU0 584 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 DENND6BQ8NEG7 585 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 PRR11Q96HE9 360 aaPredicted RBP17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 PCDHB18PQ96TA0 734 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 C11orf70Q9BRQ4 267 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 BOCQ9BWV1 1114 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 KLC2Q9H0B6 622 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 MAGEH1Q9H213 219 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 RETREG1Q9H6L5 497 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 MBNL1Q9NR56 388 aaKnown RBP17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 TAB2Q9NYJ8 693 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 SATB2Q9UPW6 733 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 ENTPD2Q9Y5L3 495 aa17.04■□□□□ 0.32
HDGFL3-203ENST00000563404 TPP1O14773 563 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 EPHB6O15197 1021 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 KDELR3O43731 214 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 MMP20O60882 483 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 RAMP2O60895 175 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 POP4O95707 220 aaKnown RBP17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 PLEKP08567 350 aaPredicted RBP17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 ETFBP38117 255 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 PTPN9P43378 593 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 JAM2P57087 298 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 SNRPD1P62314 119 aaKnown RBP17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 POLD3Q15054 466 aaPredicted RBP17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 ARL13BQ3SXY8 428 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 C3orf38Q5JPI3 329 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 STRADAQ7RTN6 431 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 VPS36Q86VN1 386 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 SLC35F3Q8IY50 421 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 TBC1D31Q96DN5 1066 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 VCPIP1Q96JH7 1222 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 LRRC61Q9BV99 259 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 CLPBQ9H078 707 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 EVA1BQ9NVM1 165 aa17.03■□□□□ 0.32
HDGFL3-203ENST00000563404 ZNF462Q96JM2 2506 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 MUSKO15146 869 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 TMCC1O94876 653 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 CELA2BP08218 269 aaPredicted RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 UNGP13051 313 aaPredicted RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 TIMP2P16035 220 aa17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 ADKP55263 362 aaKnown RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
HDGFL3-203ENST00000563404 NR0B2Q15466 257 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms