RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GPR161Q8N6U8 529 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 OR14C36Q8NHC7 312 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 MAML1Q92585 1016 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 LRIG1Q96JA1 1093 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 KLHL32Q96NJ5 620 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 TSGA13Q96PP4 275 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 PSKH2Q96QS6 385 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 HERPUD2Q9BSE4 406 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CPEB1Q9BZB8 566 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 SP110Q9HB58 689 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CAPN10Q9HC96 672 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 EIF2B4Q9UI10 523 aaKnown RBP8.66□□□□□ -1.02
UBR1-204ENST00000563239 PCDHA3Q9Y5H8 950 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 PCDH15Q96QU1 1955 aa8.66□□□□□ -1.02
UBR1-204ENST00000563239 CEP250Q9BV73 2442 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ZFHX4Q86UP3 3567 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 hCG_1818297A0A087WSY0 165 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3DA0A087WVF3 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3IA0A087WXS9 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3EA0A087X179 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3KA0A087X1G2 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 LNP1A1A4G5 178 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TSPAN11A1L157 253 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 MACROD2A1Z1Q3 448 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3FA6NER0 549 aaPredicted RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 LRRC72A6NJI9 287 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 C16orf96A6NNT2 1141 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 MEI4A8MW99 385 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3LB9A6J9 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 AREL1O15033 823 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 MATN3O15232 486 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ARHGAP6O43182 974 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 PIGNO95427 931 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 SERPINF2P08697 491 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3HP0C7X1 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 KRT10P13645 584 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ADRB3P13945 408 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TIMP2P16035 220 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ITIH2P19823 946 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 CTNNA2P26232 953 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 CD27P26842 260 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 CTNNA1P35221 906 aaKnown RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 KIF5AQ12840 1032 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 LLGL1Q15334 1064 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 DUOXA1Q1HG43 343 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TRIM61Q5EBN2 209 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 WDR45BQ5MNZ6 344 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 FAM182AQ5T1J6 154 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ZFYVE27Q5T4F4 411 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 SYCP2LQ5T4T6 812 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3GQ6DHY5 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3CQ6IPX1 549 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 SRLQ86TD4 932 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TRIM69Q86WT6 500 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ZSWIM9Q86XI8 627 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 LRRC49Q8IUZ0 686 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 RCOR2Q8IZ40 523 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TBC1D3Q8IZP1 549 aaPredicted RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 ZCCHC9Q8N567 271 aaKnown RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 ATPAF2Q8N5M1 289 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 EXD1Q8NHP7 514 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 KIAA1524Q8TCG1 905 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ALG3Q92685 438 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 FATE1Q969F0 183 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 OLFM3Q96PB7 478 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 LGMNQ99538 433 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 MGME1Q9BQP7 344 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 OSBPL1AQ9BXW6 950 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 PREBQ9HCU5 417 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 TM9SF3Q9HD45 589 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 DKK3Q9UBP4 350 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 GGT7Q9UJ14 662 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 ZFR2Q9UPR6 939 aaKnown RBP8.65□□□□□ -1.02
UBR1-204ENST00000563239 FADS3Q9Y5Q0 445 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.02
UBR1-204ENST00000563239 CHD6Q8TD26 2715 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 A0A1B0GTW7 788 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 A0A1W2PPC4 97 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 TRAFD1O14545 582 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 CDX4O14627 284 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 APOL1O14791 398 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 BCAT2O15382 392 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 AP1G1O43747 822 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 ZRANB2O95218 330 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBR1-204ENST00000563239 WNT1P04628 370 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 PECAM1P16284 738 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 CCNCP24863 283 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 DPP6P42658 865 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 MMP13P45452 471 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 NEK3P51956 506 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms