RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PID1Q7Z2X4 250 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF567Q8N184 647 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 CNTD1Q8N815 330 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 CCDC89Q8N998 374 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 C12orf50Q8NA57 414 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 GANCQ8TET4 914 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 MAGOHBQ96A72 148 aaKnown RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 TEKT5Q96M29 485 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 SPATA13Q96N96 652 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 CPEB1Q9BZB8 566 aaKnown RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 SLC6A17Q9H1V8 727 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 PABPC3Q9H361 631 aaKnown RBP19.05■□□□□ 0.64
RAB40C-207ENST00000563109 EBF1Q9UH73 591 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 RSPH14Q9UHP6 348 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 PPM1HQ9ULR3 514 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 WASF2Q9Y6W5 498 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 A0A0C4DFX4 3053 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 MUC3AQ02505 3323 aa19.05■□□□□ 0.64
RAB40C-207ENST00000563109 AXIN1O15169 862 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 MID1O15344 667 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 GALR2O43603 387 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-207ENST00000563109 OPHN1O60890 802 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 PHF2O75151 1096 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 UGT2B4P06133 528 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 CTSLP07711 333 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 SERPINF2P08697 491 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 CR2P20023 1033 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 GKP32189 559 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 SLC8A1P32418 973 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 DSC2Q02487 901 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 CKAP4Q07065 602 aaKnown RBP19.04■□□□□ 0.64
RAB40C-207ENST00000563109 ANGPT1Q15389 498 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 CYP1B1Q16678 543 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 NCEH1Q6PIU2 408 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 TSSK4Q6SA08 328 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 GDPD4Q6W3E5 623 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 ARHGEF18Q6ZSZ5 1173 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 TPSD1Q9BZJ3 242 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 SLC25A51Q9H1U9 297 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 USP29Q9HBJ7 922 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 NOD2Q9HC29 1040 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 GLOD4Q9HC38 313 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 DRG1Q9Y295 367 aaKnown RBP19.04■□□□□ 0.64
RAB40C-207ENST00000563109 NCKAP1Q9Y2A7 1128 aa19.04■□□□□ 0.64
RAB40C-207ENST00000563109 ZDBF2Q9HCK1 2354 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 CCDC163A0A0D9SF12 145 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 C5orf60A6NFR6 353 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ESPNB1AK53 854 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 SOCS5O75159 536 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF217O75362 1048 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 PIGNO95427 931 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 IFNB1P01574 187 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 NFKB1P19838 968 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 PXNP49023 591 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-207ENST00000563109 FNTAP49354 379 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 CCDC15Q0P6D6 951 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 TUBB2AQ13885 445 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 P3H1Q32P28 736 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 POM121L1PQ3SYA9 428 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF805Q5CZA5 627 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ANKRD20A2Q5SQ80 823 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ANKRD20A1Q5TYW2 823 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ANKRD20A3Q5VUR7 823 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 KBTBD6Q86V97 674 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 MAML2Q8IZL2 1156 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-207ENST00000563109 GRK7Q8WTQ7 553 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 SPACA7Q96KW9 195 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF641Q96N77 438 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-207ENST00000563109 PPP1R2P1Q96PQ5 205 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 PRRX2Q99811 253 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 OMDQ99983 421 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 TUBB2BQ9BVA1 445 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 FAM126AQ9BYI3 521 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-207ENST00000563109 GBA3Q9H227 469 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 SARDHQ9UL12 918 aa19.03■□□□□ 0.64
RAB40C-207ENST00000563109 TTC24A2A3L6 582 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-207ENST00000563109 CCDC188H7C350 402 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 GJB3O75712 270 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 C7P10643 843 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 TDGF1P13385 188 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 ITGB7P26010 798 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 CD86P42081 329 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 GDF10P55107 478 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 PRPSAP1Q14558 356 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 ZNF528Q3MIS6 628 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 WDR5BQ86VZ2 330 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 LONP2Q86WA8 852 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 HDDC3Q8N4P3 179 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 ATL2Q8NHH9 583 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 CCDC110Q8TBZ0 833 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 RTP4Q96DX8 246 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 IMP4Q96G21 291 aaKnown RBP19.02■□□□□ 0.64
RAB40C-207ENST00000563109 KLHL32Q96NJ5 620 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 RUNDC3BQ96NL0 473 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 SUV39H2Q9H5I1 410 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 FEZ2Q9UHY8 353 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-207ENST00000563109 CDC23Q9UJX2 597 aa19.02■□□□□ 0.64
RAB40C-207ENST00000563109 A0A1W2PP55 124 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 A0A1W2PQ67 120 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms