RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 JCHAINP01591 159 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 CCNB1P14635 433 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 ITPKAP23677 461 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 PTPN7P35236 360 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 NR2C2P49116 596 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 ADPRHP54922 357 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 CREB5Q02930 508 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 ZBTB17Q13105 803 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 HNRNPDQ14103 355 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 RPS6KA1Q15418 735 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 LRRC73Q5JTD7 316 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 LAIR1Q6GTX8 287 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 ERN2Q76MJ5 926 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 PARS2Q7L3T8 475 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 C11orf74Q86VG3 221 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 FAM131CQ96AQ9 280 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 CPEB1Q9BZB8 566 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 SMOC1Q9H4F8 434 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 SGK2Q9HBY8 427 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 NOD2Q9HC29 1040 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 DYRK4Q9NR20 520 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 TMEM74BQ9NUR3 256 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 SEPT10Q9P0V9 454 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 FZD4Q9ULV1 537 aa17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 ATXN2Q99700 1313 aaKnown RBP17.67■□□□□ 0.42
CCNDBP1-204ENST00000563065 OTOGLQ3ZCN5 2332 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 ITIH2P19823 946 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 CR2P20023 1033 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 ITGB7P26010 798 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 PLA2G5P39877 138 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 CSNK1DP48730 415 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 RENBPP51606 427 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 RAD51Q06609 339 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 ITKQ08881 620 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 IHHQ14623 411 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 ZNF805Q5CZA5 627 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 CCDC181Q5TID7 509 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 TRIM58Q8NG06 486 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 MGME1Q9BQP7 344 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 TLR10Q9BXR5 811 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 HDAC8Q9BY41 377 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 EFR3BQ9Y2G0 817 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 TTLL3Q9Y4R7 772 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 SLCO1B1Q9Y6L6 691 aa17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 EP300Q09472 2414 aaPredicted RBP17.66■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3DA0A087WVF3 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3IA0A087WXS9 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3EA0A087X179 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3KA0A087X1G2 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3FA6NER0 549 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 METTL12A8MUP2 240 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3LB9A6J9 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PLRG1O43660 514 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 GFRA3O60609 400 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 FSBPO95073 299 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 HLA-DQB2P05538 268 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3HP0C7X1 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PPP2CBP62714 309 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PPP2CAP67775 309 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 LYSMD4Q5XG99 296 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3GQ6DHY5 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3CQ6IPX1 549 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 FBXL19Q6PCT2 694 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 ZSWIM9Q86XI8 627 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 TBC1D3Q8IZP1 549 aaPredicted RBP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 CNTD1Q8N815 330 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 ACTL9Q8TC94 416 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PIGKQ92643 395 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 BIRC7Q96CA5 298 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PPP1R16AQ96I34 528 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 LRIG1Q96JA1 1093 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 NCDNQ9UBB6 729 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 GGT7Q9UJ14 662 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 PCDHGC4Q9Y5F7 938 aa17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 RIF1Q5UIP0 2472 aaKnown RBP17.65■□□□□ 0.42
CCNDBP1-204ENST00000563065 APOC4-APOC2K7ER74 178 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 KCNK3O14649 394 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 ENC1O14682 589 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 PPP1R12AO14974 1030 aaPredicted RBP17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 EPN2O95208 641 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 APOC2P02655 101 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 PRKCGP05129 697 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 RETP07949 1114 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 ADRB3P13945 408 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 TIMP2P16035 220 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 CETN2P41208 172 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 ABL2P42684 1182 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 NEK3P51956 506 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 OTUD4Q01804 1114 aaKnown RBP17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 DSC2Q02487 901 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 NIPAL4Q0D2K0 466 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 PRKD1Q15139 912 aaPredicted RBP17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 ZNF569Q5MCW4 686 aa17.64■□□□□ 0.41
CCNDBP1-204ENST00000563065 ALYREFQ86V81 257 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms