RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 INSIG1O15503 277 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 KCNN4O15554 427 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 LEFTY1O75610 366 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
CDH11-204ENST00000562712 DNTTP04053 509 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 CTSLP07711 333 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 C5AR1P21730 350 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 SLC8A1P32418 973 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 RGRP47804 291 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 AP1S1P61966 158 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 CSTF1Q05048 431 aaKnown RBP12.91□□□□□ -0.34
CDH11-204ENST00000562712 ITKQ08881 620 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 SFSWAPQ12872 951 aaKnown RBP12.91□□□□□ -0.34
CDH11-204ENST00000562712 CST6Q15828 149 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 ANO7Q6IWH7 933 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 NCEH1Q6PIU2 408 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 PGBD3Q8N328 593 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 MDGA1Q8NFP4 955 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 PIP4K2CQ8TBX8 421 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 ATG4AQ8WYN0 398 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 NELL1Q92832 810 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 ERLEC1Q96DZ1 483 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 EXOC2Q96KP1 924 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 AGAP3Q96P47 875 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 TMEM121Q9BTD3 319 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 C10orf88Q9H8K7 445 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 SCUBE2Q9NQ36 999 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 BCCIPQ9P287 314 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDH11-204ENST00000562712 EVLQ9UI08 416 aaPredicted RBP12.91□□□□□ -0.34
CDH11-204ENST00000562712 SARDHQ9UL12 918 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 SPTBN4Q9H254 2564 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ZNF217O75362 1048 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 GCATO75600 419 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 IGLV3-19P01714 112 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ACADMP11310 421 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 MAXP61244 160 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 LMNB2Q03252 620 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 SNX1Q13596 522 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 TUBB2AQ13885 445 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 TSSK4Q6SA08 328 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 GDPD4Q6W3E5 623 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 USP30Q70CQ3 517 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ZNF567Q8N184 647 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 FAM71DQ8N9W8 422 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 C12orf50Q8NA57 414 aaPredicted RBP12.9□□□□□ -0.34
CDH11-204ENST00000562712 OR6K2Q8NGY2 324 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ATL2Q8NHH9 583 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ARRDC2Q8TBH0 407 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 SEMA3CQ99985 751 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 TUBB2BQ9BVA1 445 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 SLC25A51Q9H1U9 297 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 SLC6A17Q9H1V8 727 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 PABPC3Q9H361 631 aaKnown RBP12.9□□□□□ -0.34
CDH11-204ENST00000562712 SUV39H2Q9H5I1 410 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ZDHHC6Q9H6R6 413 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 ATP13A3Q9H7F0 1226 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 GLOD4Q9HC38 313 aa12.9□□□□□ -0.34
CDH11-204ENST00000562712 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
CDH11-204ENST00000562712 WDR87Q6ZQQ6 2873 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 TTC24A2A3L6 582 aaPredicted RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 AXIN1O15169 862 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 MID1O15344 667 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 GFRA3O60609 400 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 OPHN1O60890 802 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 SERPINF2P08697 491 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 SP9P0CG40 484 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 ITGB7P26010 798 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 SERPINA4P29622 427 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 OXTRP30559 389 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 GKP32189 559 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 TPMTP51580 245 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 BCL2L1Q07817 233 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 CCDC15Q0P6D6 951 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 USP39Q53GS9 565 aaKnown RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 ZNF805Q5CZA5 627 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 KIAA1324Q6UXG2 1013 aaKnown RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 KBTBD6Q86V97 674 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms