RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 CYP2J2P51589 502 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 RHAGQ02094 409 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 EFR3AQ14156 821 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 C5orf22Q49AR2 442 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 MTFR2Q6P444 385 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 HERC6Q8IVU3 1022 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 DCUN1D3Q8IWE4 304 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 SMAP1Q8IYB5 467 aaPredicted RBP3.3□□□□□ -1.88
DENND4A-205ENST00000562540 CMASQ8NFW8 434 aaPredicted RBP3.3□□□□□ -1.88
DENND4A-205ENST00000562540 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
DENND4A-205ENST00000562540 FAM110DQ8TAY7 271 aaPredicted RBP3.3□□□□□ -1.88
DENND4A-205ENST00000562540 PPM1EQ8WY54 764 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 HERC2P3Q9BVR0 1158 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 SLC22A11Q9NSA0 550 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 RRN3Q9NYV6 651 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 UPB1Q9UBR1 384 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 DNAJC16Q9Y2G8 782 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 GDAQ9Y2T3 454 aa3.3□□□□□ -1.88
DENND4A-205ENST00000562540 TCRBV7S3A2A0A539 114 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TMEM247A6NEH6 219 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 ANTXRLA6NF34 631 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 PEX12O00623 359 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 NPHP1O15259 732 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 STRNO43815 780 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 HBP1O60381 514 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TSPAN3O60637 253 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 HLA-DQA2P01906 255 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 CNPP09543 421 aaKnown RBP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 GM2AP17900 193 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 AVPR1AP37288 418 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 MAPK9P45984 424 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 ZBTB16Q05516 673 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 BYSLQ13895 437 aaKnown RBP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TMEM95Q3KNT9 176 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 PMS2CLQ68D20 193 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TMEM71Q6P5X7 295 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 LRRTM4Q86VH4 590 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 BRSK2Q8IWQ3 736 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 LMNTD1Q8N9Z9 388 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 USP38Q8NB14 1042 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 C2CD4CQ8TF44 421 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TAF15Q92804 592 aaKnown RBP eCLIP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TWNKQ96RR1 684 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 CADM1Q9BY67 442 aaKnown RBP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 FRMD8Q9BZ67 464 aaPredicted RBP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 IL25Q9H293 177 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 KLHL31Q9H511 634 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 ACTR5Q9H9F9 607 aaPredicted RBP3.29□□□□□ -1.88
DENND4A-205ENST00000562540 Q9N2J8 555 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 TMEM248Q9NWD8 314 aa3.29□□□□□ -1.88
DENND4A-205ENST00000562540 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.28□□□□□ -1.88
DENND4A-205ENST00000562540 VWA3AA6NCI4 1184 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 KLK10O43240 276 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 LDB2O43679 373 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 LMX1BO60663 402 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 WEE2P0C1S8 567 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 NAGAP17050 411 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 KLRC2P26717 231 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 AVPR2P30518 371 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 PPP3CCP48454 512 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 MVDP53602 400 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 ARHGAP8P85298 464 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 UBE3AQ05086 875 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 AP5B1Q2VPB7 878 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 ZNF284Q2VY69 593 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 CBWD5Q5RIA9 395 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 MAP3K21Q5TCX8 1036 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 STPG1Q5TH74 334 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 AADACL2Q6P093 401 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 DENND1BQ6P3S1 775 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.28□□□□□ -1.88
DENND4A-205ENST00000562540 PALB2Q86YC2 1186 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 TMEM217Q8N7C4 229 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 MIGA1Q8NAN2 632 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 NCSTNQ92542 709 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 USP13Q92995 863 aaPredicted RBP3.28□□□□□ -1.88
DENND4A-205ENST00000562540 ADGRG7Q96K78 797 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 UBXN10Q96LJ8 280 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 FRG2BQ96QU4 278 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 CTDSP1Q9GZU7 261 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 RIC8AQ9NPQ8 531 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 DHDHQ9UQ10 334 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 RAP2CQ9Y3L5 183 aa3.28□□□□□ -1.88
DENND4A-205ENST00000562540 NCAM2O15394 837 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 CREB3O43889 395 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 SERPINI2O75830 405 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 CBX6O95503 412 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 FCGR2AP12318 317 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 ARSAP15289 507 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 GNLYP22749 145 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 CNTFP26441 200 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 SKIV2L2P42285 1042 aaKnown RBP3.27□□□□□ -1.89
DENND4A-205ENST00000562540 GLIPR1P48060 266 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 IL13RA2Q14627 380 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 VWA5B1Q5TIE3 1220 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 ATG16L1Q676U5 607 aa3.27□□□□□ -1.89
DENND4A-205ENST00000562540 HEPHL1Q6MZM0 1159 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms