RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 MGME1Q9BQP7 344 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 PARD6AQ9NPB6 346 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 VPS45Q9NRW7 570 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 TPX2Q9ULW0 747 aaKnown RBP16.94■□□□□ 0.3
CLK3-207ENST00000562389 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.94■□□□□ 0.3
CLK3-207ENST00000562389 MUSKO15146 869 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 MATN3O15232 486 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 INSIG1O15503 277 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 CST8O60676 142 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 FTCDO95954 541 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 UGT2B4P06133 528 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 ZNF806P0C7X5 589 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 KRT10P13645 584 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 ADRB3P13945 408 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 PTPN7P35236 360 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 MMP13P45452 471 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 MAPK8P45983 427 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 NR2C2P49116 596 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 CCR5P51681 352 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 TAS2R38P59533 333 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 DYNLT1P63172 113 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 PPIDQ08752 370 aaKnown RBP16.93■□□□□ 0.3
CLK3-207ENST00000562389 MARC1Q5VT66 337 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 KAZNQ674X7 775 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 NPNTQ6UXI9 565 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 PARS2Q7L3T8 475 aaKnown RBP16.93■□□□□ 0.3
CLK3-207ENST00000562389 RABEPKQ7Z6M1 372 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 SRLQ86TD4 932 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 UBL4BQ8N7F7 174 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 ALG3Q92685 438 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 KLHL32Q96NJ5 620 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 PREBQ9HCU5 417 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 SEMA4GQ9NTN9 838 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 TMEM74BQ9NUR3 256 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 EFR3BQ9Y2G0 817 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 PPP2R2CQ9Y2T4 447 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 HEY1Q9Y5J3 304 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 FAM186AA6NE01 2351 aa16.93■□□□□ 0.3
CLK3-207ENST00000562389 ATXN2Q99700 1313 aaKnown RBP16.93■□□□□ 0.3
CLK3-207ENST00000562389 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 FAM47DPA6NHR8 397 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 C16orf96A6NNT2 1141 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PPP1R12AO14974 1030 aaPredicted RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 FOXD2O60548 495 aaPredicted RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 PIGNO95427 931 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 IGHV4-34P06331 123 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PTMAP06454 111 aaKnown RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 CR2P20023 1033 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 AP1S1P61966 158 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PDK1Q15118 436 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 RALGPS1Q5JS13 557 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 FBXL19Q6PCT2 694 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 BZW1Q7L1Q6 419 aaKnown RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 TRIM69Q86WT6 500 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 CCDC13Q8IYE1 715 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 RGL4Q8IZJ4 473 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PGBD5Q8N414 524 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 CCNYQ8ND76 341 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 HCAR2Q8TDS4 363 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 RAB7BQ96AH8 199 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 BIRC7Q96CA5 298 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 HES6Q96HZ4 224 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 ZNF641Q96N77 438 aaPredicted RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 NUDCD1Q96RS6 583 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 BRD8Q9H0E9 1235 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 LZTFL1Q9NQ48 299 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 DKK3Q9UBP4 350 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 SUSD2Q9UGT4 822 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PACSIN2Q9UNF0 486 aaPredicted RBP16.92■□□□□ 0.3
CLK3-207ENST00000562389 PLXNA2O75051 1894 aa16.92■□□□□ 0.3
CLK3-207ENST00000562389 PI4KAP42356 2102 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3DA0A087WVF3 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3IA0A087WXS9 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3EA0A087X179 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3KA0A087X1G2 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3FA6NER0 549 aaPredicted RBP16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3LB9A6J9 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 AP1G1O43747 822 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 FSBPO95073 299 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3HP0C7X1 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 CETN2P41208 172 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 SCNN1BP51168 640 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 LLGL1Q15334 1064 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 CCDC6Q16204 474 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3GQ6DHY5 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 ALG1LQ6GMV1 187 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3CQ6IPX1 549 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 NEK5Q6P3R8 708 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 BBS12Q6ZW61 710 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 TBC1D3Q8IZP1 549 aaPredicted RBP16.91■□□□□ 0.3
CLK3-207ENST00000562389 CEP76Q8TAP6 659 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 SNX19Q92543 992 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 LGMNQ99538 433 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 KCNF1Q9H3M0 494 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 SUV39H2Q9H5I1 410 aa16.91■□□□□ 0.3
CLK3-207ENST00000562389 ATP13A3Q9H7F0 1226 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms