RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 SKA1Q96BD8 255 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 GDAP1L1Q96MZ0 367 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 LRRC19Q9H756 370 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 SP110Q9HB58 689 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 MRPL47Q9HD33 250 aaKnown RBP9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 WASF3Q9UPY6 502 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 COQ6Q9Y2Z9 468 aa9.61□□□□□ -0.87
NSMCE1-203ENST00000562039 CEP295Q9C0D2 2601 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 POM121BA6NF01 834 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ARHGAP42A6NI28 874 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 WASH4PA8MWX3 477 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 A8MX80 341 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 H3BRJ5 948 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 SCAMP1O15126 338 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 FGF10O15520 208 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 FFAR2O15552 330 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 SPINT1O43278 529 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 PRAMEF11O60813 436 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 POP4O95707 220 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 CD48P09326 243 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ZNF883P0CG24 379 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 MYBL1P10243 752 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 HNRNPA2B1P22626 353 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 XPAP23025 273 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 EPHA8P29322 1005 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 GEMIN4P57678 1058 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 YBEYP58557 167 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 KRT81Q14533 505 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 PARP15Q460N3 678 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ATP13A4Q4VNC1 1196 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 TPRG1LQ5T0D9 272 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 UNQ6494/PRO21346Q6UXR6 183 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 Q6ZSR6 202 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 TTC7BQ86TV6 843 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 CAMK1DQ8IU85 385 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ARHGAP12Q8IWW6 846 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 UMODL1-AS1Q8N2C9 162 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 MFSD2AQ8NA29 543 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 ISG20Q96AZ6 181 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 BMFQ96LC9 184 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 CHP1Q99653 195 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 SLC17A9Q9BYT1 436 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 KDM4CQ9H3R0 1056 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 DEF6Q9H4E7 631 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 PDFQ9HBH1 243 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 PCDH18Q9HCL0 1135 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 SPTLC3Q9NUV7 552 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 UCKL1Q9NWZ5 548 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 CTTNBP2NLQ9P2B4 639 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 FTSJ1Q9UET6 329 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 DMTF1Q9Y222 760 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■□□□□ 9.4
NSMCE1-203ENST00000562039 CACNA1BQ00975 2339 aa9.6□□□□□ -0.87
NSMCE1-203ENST00000562039 IGF2RP11717 2491 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 MUSKO15146 869 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 CBFA2T2O43439 604 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 PALMO75781 387 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 LDOC1O95751 146 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 CYP1A2P05177 515 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 TNNT1P13805 278 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 TIMP2P16035 220 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 GRK6P43250 576 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 NDST2P52849 883 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 AIF1P55008 147 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 TAS2R40P59535 323 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 RPS21P63220 83 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SHC2P98077 582 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 CCDC15Q0P6D6 951 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SGCGQ13326 291 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 TMEM259Q4ZIN3 620 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 DHRS13Q6UX07 377 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 ZSWIM9Q86XI8 627 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SLC22A18ASQ8N1D0 253 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 TMEM145Q8NBT3 493 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 BAHD1Q8TBE0 780 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 ZNF564Q8TBZ8 553 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SAP25Q8TEE9 199 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SYN2Q92777 582 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 CNDP2Q96KP4 475 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 NSMCE3Q96MG7 304 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 IP6K2Q9UHH9 426 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 IPO11Q9UI26 975 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 APOBEC2Q9Y235 224 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 PCDHGB2Q9Y5G2 931 aa9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 BZW2Q9Y6E2 419 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-203ENST00000562039 SPEGQ15772 3267 aa9.58□□□□□ -0.88
NSMCE1-203ENST00000562039 ARID1BQ8NFD5 2236 aaPredicted RBP9.58□□□□□ -0.88
NSMCE1-203ENST00000562039 SHROOM3Q8TF72 1996 aa9.58□□□□□ -0.88
NSMCE1-203ENST00000562039 ZSCAN5CA6NGD5 496 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms