RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 FAM170BA6NMN3 283 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 TMEM110-MUSTN1A8MSY1 372 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 GPR89AB7ZAQ6 455 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 NEDD8-MDP1E9PL57 170 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 APOL1O14791 398 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 MSI1O43347 362 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 TJP3O95049 919 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 GPR89BP0CG08 455 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 KRT10P13645 584 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 FOSL1P15407 271 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 P2RY2P41231 377 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 GARSP41250 739 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 DCDC1P59894 354 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 ST8SIA6P61647 398 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 SNRPD1P62314 119 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CRY1Q16526 586 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CLPPQ16740 277 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 C22orf39Q6P5X5 142 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CCBE1Q6UXH8 406 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 ANKRD13BQ86YJ7 626 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 MIB1Q86YT6 1006 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 PQLC3Q8N755 202 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 DDI1Q8WTU0 396 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 RSAD2Q8WXG1 361 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 DNASE2BQ8WZ79 361 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 FOXJ1Q92949 421 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 RPRD1AQ96P16 312 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 MCCC1Q96RQ3 725 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LMAN1LQ9HAT1 526 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 USP29Q9HBJ7 922 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 HEBP1Q9NRV9 189 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CWC15Q9P013 229 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LUZP4Q9P127 313 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LHX3Q9UBR4 397 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 SUSD2Q9UGT4 822 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 PPM1HQ9ULR3 514 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 ALG6Q9Y672 507 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 STON1Q9Y6Q2 735 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 C5orf60A6NFR6 353 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 OTOL1A6NHN0 477 aaPredicted RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 RASA4BC9J798 803 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 RASA4O43374 803 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LATO43561 262 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 PLRG1O43660 514 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 IGSF6O95976 241 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 IL1R2P27930 398 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CSKP41240 450 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CDK16Q00536 496 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 P3H1Q32P28 736 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 CARD16Q5EG05 197 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 C9orf64Q5T6V5 341 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 REXO1L1PQ8IX06 675 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 NRSN1Q8IZ57 195 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 OR8D1Q8WZ84 308 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 KRT35Q92764 455 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 ELMO3Q96BJ8 720 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LRRC45Q96CN5 670 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 RANBP9Q96S59 729 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 LINC00597Q9H2U6 94 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 ATP13A1Q9HD20 1204 aa5.72□□□□□ -1.49
LINC01963-201ENST00000562038 INTS6Q9UL03 887 aaKnown RBP5.72□□□□□ -1.49
LINC01963-201ENST00000562038 TSPAN6O43657 245 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 FZD6O60353 706 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 MAFKO60675 156 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 MAGEC1O60732 1142 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 RNASEH1O60930 286 aaKnown RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 DNAJC6O75061 913 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ADAM23O75077 832 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 POP4O95707 220 aaKnown RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 SCGB1D2O95969 90 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 CD160O95971 181 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ITGAVP06756 1048 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ASGR2P07307 311 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 SRCP12931 536 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ZNF30P17039 623 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 TCP1P17987 556 aaKnown RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 COMTP21964 271 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 FNTAP49354 379 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 PITX1P78337 314 aaPredicted RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ARF5P84085 180 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ZNF234Q14588 700 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 POLD3Q15054 466 aaPredicted RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 PON2Q15165 354 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 C15orf59Q2T9L4 293 aaPredicted RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 TTC31Q49AM3 519 aaPredicted RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 KIAA1328Q86T90 577 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 KIAA1524Q8TCG1 905 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 MRM3Q9HC36 420 aaKnown RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 VPS51Q9UID3 782 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 A0A1W2PRQ8 180 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 H0Y626 953 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 LAMTOR5O43504 91 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 OPHN1O60890 802 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 PPFIA2O75334 1257 aa5.71□□□□□ -1.5
LINC01963-201ENST00000562038 ZNF821O75541 412 aaPredicted RBP5.71□□□□□ -1.5
LINC01963-201ENST00000562038 GCATO75600 419 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms