RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 KLHL32Q96NJ5 620 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 CCNL2Q96S94 520 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 HEPHQ9BQS7 1158 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 ARHGAP9Q9BRR9 750 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 CPEB1Q9BZB8 566 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 ARHGEF38Q9NXL2 777 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 HECAQ9UBI9 543 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 PADI4Q9UM07 663 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 CCDC187A0A096LP49 1063 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ZMPSTE24O75844 475 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 GJB6O95452 261 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 CD160O95971 181 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 RPLP0P05388 317 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ANXA6P08133 673 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 NOS2P35228 1153 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 UGT1A5P35504 534 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ETV5P41161 510 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 CXCR3P49682 368 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 CDO1Q16878 200 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ARL13BQ3SXY8 428 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 USP53Q70EK8 1073 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ZFAND4Q86XD8 727 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 EMC1Q8N766 993 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 RNF31Q96EP0 1072 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 WBP1Q96G27 269 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 EXOC2Q96KP1 924 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 NPY6RQ99463 290 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 BOCQ9BWV1 1114 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 EVA1BQ9NVM1 165 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 DOLKQ9UPQ8 538 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 HS3ST3A1Q9Y663 406 aa11.87□□□□□ -0.51
NSMCE1-202ENST00000561960 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PLD2O14939 933 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PMM2O15305 246 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 P4HA2O15460 535 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 NOBOXO60393 691 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PRAMEF10O60809 474 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 KRT9P35527 623 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 FLT3P36888 993 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 MAPK10P53779 464 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PFN3P60673 137 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 ATP11AP98196 1134 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 GNA12Q03113 381 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 IRF4Q15306 451 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 KLHL40Q2TBA0 621 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 C5orf22Q49AR2 442 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 RWDD4Q6NW29 188 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 RAB11FIP2Q7L804 512 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 SLC26A9Q7LBE3 791 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 TMPRSS9Q7Z410 1059 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PTRH1Q86Y79 214 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 GFM1Q96RP9 751 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 EPAS1Q99814 870 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 C1QTNF2Q9BXJ5 285 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 FOXJ2Q9P0K8 574 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 ZNF212Q9UDV6 495 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 OR1A2Q9Y585 309 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 PCDHGA8Q9Y5G5 932 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 NBASA2RRP1 2371 aa11.86□□□□□ -0.51
NSMCE1-202ENST00000561960 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CAPN8A6NHC0 703 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 DRGXA6NNA5 263 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM72CH0Y354 149 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 INSIG1O15503 277 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 PIGNO95427 931 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 PCCBP05166 539 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 GLI1P08151 1106 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CLCN1P35523 988 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 EIF4A3P38919 411 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 PAK1Q13153 545 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM72AQ5TYM5 149 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM72DQ6L9T8 149 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 SETD3Q86TU7 594 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM72BQ86X60 149 aa11.85□□□□□ -0.51
NSMCE1-202ENST00000561960 DCP2Q8IU60 420 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms