RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ACSL4O60488 711 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 PRAMEF11O60813 436 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 TRIM13O60858 407 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 MYCP01106 439 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 ALOX15P16050 662 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 OR1D2P34982 312 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 AVPR1AP37288 418 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ETFBP38117 255 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 CD151P48509 253 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ALDH7A1P49419 539 aaKnown RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 TUBB3Q13509 450 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 TMCO4Q5TGY1 634 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ICE2Q659A1 982 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ZNF470Q6ECI4 717 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMG1-205ENST00000561947 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 TREML1Q86YW5 311 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 MFSD6LQ8IWD5 586 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 FAM13CQ8NE31 585 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 PDZD8Q8NEN9 1154 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 AGAP11Q8TF27 550 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 OVCA2Q8WZ82 227 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 VN1R3Q9BXE9 311 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 CWH43Q9H720 699 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 DNAJC28Q9NX36 388 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 UXTQ9UBK9 157 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 FBXO5Q9UKT4 447 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 OGDHLQ9ULD0 1010 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 TTC24A2A3L6 582 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 UPP2O95045 317 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 PAPSS2O95340 614 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 CCND1P24385 295 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 SLC6A4P31645 630 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ATN1P54259 1190 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 RAB10P61026 200 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 TBCCQ15814 346 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 NEPROQ6NW34 567 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ZYG11AQ6WRX3 759 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 NAPRTQ6XQN6 538 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 RINLQ6ZS11 566 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 KIAA0408Q6ZU52 694 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 ANKRD33Q7Z3H0 272 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 MAVSQ7Z434 540 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 KCTD4Q8WVF5 259 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 IGSF21Q96ID5 467 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 CCDC106Q9BWC9 280 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 CADM1Q9BY67 442 aaKnown RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 ACE2Q9BYF1 805 aaPredicted RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 POLR1EQ9GZS1 481 aaKnown RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 PDFQ9HBH1 243 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 OXSMQ9NWU1 459 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 RPL26L1Q9UNX3 145 aaKnown RBP9.91□□□□□ -0.82
SMG1-205ENST00000561947 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 COL4A6Q14031 1691 aa9.91□□□□□ -0.82
SMG1-205ENST00000561947 LOC285095A0A1B0GVY8 99 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 GJB5O95377 273 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ATXN1LP0C7T5 689 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 STMN1P16949 149 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 CRABP2P29373 138 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 PGGT1BP53609 377 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ALDH18A1P54886 795 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SIRPB2Q5JXA9 342 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 CEP97Q8IW35 865 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 CENPLQ8N0S6 344 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 CFAP52Q8N1V2 620 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 TMEM151AQ8N4L1 468 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 GABPB2Q8TAK5 448 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 CALML6Q8TD86 181 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ELMO2Q96JJ3 720 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 SCYL1Q96KG9 808 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZNF512Q96ME7 567 aaPredicted RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SEMA3CQ99985 751 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 NACA2Q9H009 215 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 RETREG1Q9H6L5 497 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 AFF4Q9UHB7 1163 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SORCS3Q9UPU3 1222 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 RUVBL2Q9Y230 463 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZNF840PA6NDX5 716 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 MROH6A6NGR9 719 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 TK2O00142 265 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZNF195O14628 629 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 GYG2O15488 501 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 GSC2O15499 205 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 SEC24AO95486 1093 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 HSPA4LO95757 839 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ENO1P06733 434 aaKnown RBP9.9□□□□□ -0.82
SMG1-205ENST00000561947 SBK3P0C264 359 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 SLC11A2P49281 568 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 IDH3AP50213 366 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 PRKAA2P54646 552 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 ZNF235Q14590 738 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 WASHC2DQ5SRD0 308 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 HECTD3Q5T447 861 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 LRRC8EQ6NSJ5 796 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 RFWD3Q6PCD5 774 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 KLHDC10Q6PID8 442 aa9.9□□□□□ -0.82
SMG1-205ENST00000561947 OR13J1Q8NGT2 312 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms