RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SLC10A7Q0GE19 358 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 NAB1Q13506 487 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 SERINC3Q13530 473 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 HNRNPDQ14103 355 aaKnown RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 GSTA3Q16772 222 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 CASC4Q6P4E1 433 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 UBE2Q1Q7Z7E8 422 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZBTB8BQ8NAP8 495 aaPredicted RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ARRDC2Q8TBH0 407 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 DYDC1Q8WWB3 177 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 PSMG2Q969U7 264 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 IMP4Q96G21 291 aaKnown RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 CERS2Q96G23 380 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 KLHL5Q96PQ7 755 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLCO1B3Q9NPD5 702 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 CHRAC1Q9NRG0 131 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPG21Q9NZD8 308 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 BFARQ9NZS9 450 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
TUBGCP4-202ENST00000561691 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 C2orf78A6NCI8 922 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 MUSKO15146 869 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ACSL4O60488 711 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 EDF1O60869 148 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 KRT37O76014 449 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 STC2O76061 302 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 F7P08709 466 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 LAG3P18627 525 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 NMBRP28336 390 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 HOXD9P28356 352 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATP5C1P36542 298 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SERPINB9P50453 376 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SGSHP51688 502 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 KPNA1P52294 538 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZXDBP98169 803 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CDH17Q12864 832 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CBX3Q13185 183 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TEDDM1Q5T9Z0 273 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 MROH9Q5TGP6 573 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TIGD7Q6NT04 549 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 RFWD3Q6PCD5 774 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CHSY1Q86X52 802 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TCEAL8Q8IYN2 117 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 PDZD8Q8NEN9 1154 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF75CPQ92670 426 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 MTBPQ96DY7 904 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 NSMCE3Q96MG7 304 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 NR1H4Q96RI1 486 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TBL1YQ9BQ87 522 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 IL22Q9GZX6 179 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLC25A51Q9H1U9 297 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TLE6Q9H808 572 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CYP4F11Q9HBI6 524 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ARNT2Q9HBZ2 717 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 GKN1Q9NS71 199 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 EMCNQ9ULC0 261 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 MYLKQ15746 1914 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TEX28O15482 410 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 PSMD3O43242 534 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 LPXNO60711 386 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 PRAMEF11O60813 436 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 GJB3O75712 270 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 F11P03951 625 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ASLP04424 464 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 POLBP06746 335 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CHRNA4P43681 627 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ARCN1P48444 511 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 MAPKAPK2P49137 400 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 PHEXP78562 749 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 HTRA4P83105 476 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 DNAJC3Q13217 504 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 KPNB1Q14974 876 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZRSR2Q15696 482 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SMAD1Q15797 465 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SH2D4BQ5SQS7 431 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 HECTD3Q5T447 861 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 NAPEPLDQ6IQ20 393 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 KIAA1841Q6NSI8 718 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CCDC117Q8IWD4 279 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 GPR65Q8IYL9 337 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ACVR1CQ8NER5 493 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 LRRC8CQ8TDW0 803 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 NRG4Q8WWG1 115 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF669Q96BR6 464 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 TMEM169Q96HH4 297 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 RPRD1AQ96P16 312 aaPredicted RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 FAM111AQ96PZ2 611 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLC22A12Q96S37 553 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 CDK5RAP1Q96SZ6 601 aaKnown RBP10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 AGAP2Q99490 1192 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 LRRC3Q9BY71 257 aa10.35□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZBP1Q9H171 429 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms