RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ANO4Q32M45 955 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SAMD4BQ5PRF9 694 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 ARL10Q8N8L6 244 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ADAMTS16Q8TE57 1224 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 LPAR1Q92633 364 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 NXNL1Q96CM4 212 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 RPL10LQ96L21 214 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 DOK1Q99704 481 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SACM1LQ9NTJ5 587 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 OAZ3Q9UMX2 235 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ERGIC3Q9Y282 383 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 B4GAT1O43505 415 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 ESRRBO95718 433 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 OXSR1O95747 527 aaPredicted RBP16.66■□□□□ 0.26
TPM1-228ENST00000560975 APOA4P06727 396 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 CCNA2P20248 432 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 MLLT10P55197 1068 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 SLC7A5P1Q8MH63 180 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 SPPL2BQ8TCT7 592 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 STYXQ8WUJ0 223 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 PCYT2Q99447 389 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 NIFKQ9BYG3 293 aaKnown RBP16.66■□□□□ 0.26
TPM1-228ENST00000560975 NRBP2Q9NSY0 501 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 TMED5Q9Y3A6 229 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 ATP6AP2A0A1C7CYW4 349 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 KRBA1A5PL33 1030 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 TRPC5OSA6NMA1 111 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 ATP6AP2O75787 350 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 BCL10O95999 233 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 SNRPB2P08579 225 aaKnown RBP16.66■□□□□ 0.26
TPM1-228ENST00000560975 LCP1P13796 627 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 NR4A1P22736 598 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 POLR2IP36954 125 aaKnown RBP16.66■□□□□ 0.26
TPM1-228ENST00000560975 SLC36A3Q495N2 470 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 PERM1Q5SV97 790 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 IGFN1Q86VF2 1251 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 BPIFB6Q8NFQ5 453 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 PPP1R16BQ96T49 567 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 CDT1Q9H211 546 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 TNFRSF12AQ9NP84 129 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 NCKIPSDQ9NZQ3 722 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 DAPK2Q9UIK4 370 aa16.66■□□□□ 0.26
TPM1-228ENST00000560975 GPC6Q9Y625 555 aaPredicted RBP16.66■□□□□ 0.26
TPM1-228ENST00000560975 EI24O14681 340 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 HSPA8P11142 646 aaKnown RBP16.65■□□□□ 0.26
TPM1-228ENST00000560975 PSMD8P48556 350 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 HK2P52789 917 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 HSDL1Q3SXM5 330 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 IL31Q6EBC2 164 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 ABRAXAS1Q6UWZ7 409 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 BTLAQ7Z6A9 289 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 PIGZQ86VD9 579 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 CENPLQ8N0S6 344 aaPredicted RBP16.65■□□□□ 0.26
TPM1-228ENST00000560975 PELI3Q8N2H9 469 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 C7orf31Q8N865 590 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 ANKRD52Q8NB46 1076 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 CPB2Q96IY4 423 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 NT5C1AQ9BXI3 368 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TRIM8Q9BZR9 551 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 C9JVG2 144 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 SNAP91O60641 907 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
TPM1-228ENST00000560975 NFKBIAP25963 317 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 NMBRP28336 390 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 GALNT2Q10471 571 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TARBP2Q15633 366 aaKnown RBP16.65■□□□□ 0.26
TPM1-228ENST00000560975 SOWAHAQ2M3V2 549 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TSTD2Q5T7W7 516 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TMEM135Q86UB9 458 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TMCO5AQ8N6Q1 288 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 MFSD2AQ8NA29 543 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 RDH11Q8TC12 318 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 KCNN1Q92952 543 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 POMKQ9H5K3 350 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 TMEM181Q9P2C4 612 aa16.65■□□□□ 0.26
TPM1-228ENST00000560975 SIP14410 1827 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 DHRS12A0PJE2 317 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 HACD1B0YJ81 288 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 NRP2O60462 931 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
TPM1-228ENST00000560975 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 STAT5BP51692 787 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 SLC2A7Q6PXP3 512 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 SNX29P2Q8IUI4 249 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 FANCEQ9HB96 536 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 KIAA1522Q9P206 1035 aaPredicted RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 ST14Q9Y5Y6 855 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 CNOT3O75175 753 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 MT-ND1P03886 318 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 JAK1P23458 1154 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 YWHAQP27348 245 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 OXTRP30559 389 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 TTKP33981 857 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms