RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	HNRNPD	Q14103	355 aa	Known RBP	11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	RFTN1	Q14699	578 aa	Predicted RBP	11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	PCSK7	Q16549	785 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	TEX44	Q53QW1	395 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	NUDT18	Q6ZVK8	323 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	SYT13	Q7L8C5	426 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	SYNPO	Q8N3V7	929 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	SPATA4	Q8NEY3	305 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	TSTD1	Q8NFU3	115 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	KIF18A	Q8NI77	898 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	PIP4K2C	Q8TBX8	421 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	NSMCE1	Q8WV22	266 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	OR8D1	Q8WZ84	308 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	FATE1	Q969F0	183 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	ISG20	Q96AZ6	181 aa	Known RBP	11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	RTP4	Q96DX8	246 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	MRGPRX1	Q96LB2	322 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	KLHL32	Q96NJ5	620 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	NELL2	Q99435	816 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	CARD6	Q9BX69	1037 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	IL36A	Q9UHA7	158 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	AMACR	Q9UHK6	382 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944	NEU2	Q9Y3R4	380 aa		11.4	□□□□□ -0.58
CERS3-208	ENST00000560944		A0A1W2PP55	124 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	C5orf60	A6NFR6	353 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	KIF2A	O00139	706 aa	Predicted RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	KPNA3	O00505	521 aa	Predicted RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	TTI1	O43156	1089 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	RAD51C	O43502	376 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	USP12	O75317	370 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	ITGAV	P06756	1048 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PDHA1	P08559	390 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PIRT	P0C851	137 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	AVPR2	P30518	371 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	DRD3	P35462	400 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CHRNA4	P43681	627 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	RENBP	P51606	427 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	SNRPD1	P62314	119 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CNTN1	Q12860	1018 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	MTM1	Q13496	603 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	GALNT3	Q14435	633 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	ELAVL3	Q14576	367 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	STARD3	Q14849	445 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CST6	Q15828	149 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	WHAMMP3	Q1A5X7	153 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	ANKRD22	Q5VYY1	191 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	ZNF776	Q68DI1	518 aa	Predicted RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	ALG1L	Q6GMV1	187 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	SDE2	Q6IQ49	451 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CCDC137	Q6PK04	289 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	KDELC1	Q6UW63	502 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	BZW1	Q7L1Q6	419 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	GSTA5	Q7RTV2	222 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PID1	Q7Z2X4	250 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	TRMT11	Q7Z4G4	463 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	TMPRSS6	Q8IU80	811 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	LRRC49	Q8IUZ0	686 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	KDM1B	Q8NB78	822 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	UBE2Q2	Q8WVN8	375 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	MAIP1	Q8WWC4	291 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CASKIN2	Q8WXE0	1202 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	IMP4	Q96G21	291 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	NUDCD1	Q96RS6	583 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	HEPH	Q9BQS7	1158 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	POLR1E	Q9GZS1	481 aa	Known RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PRMT8	Q9NR22	394 aa	Predicted RBP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	SUN2	Q9UH99	717 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	PPM1H	Q9ULR3	514 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	SLC8A2	Q9UPR5	921 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	CHKB	Q9Y259	395 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	RAI2	Q9Y5P3	530 aa		11.39	□□□□□ -0.59
CERS3-208	ENST00000560944	BPTF	Q12830	3046 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	GOLGA6L10	A0A0M3HER8	536 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	TARSL2	A2RTX5	802 aa	Known RBP	11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	GOLGA8CP	A6NN73	597 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944		A8MX80	341 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	TRAFD1	O14545	582 aa	Predicted RBP	11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	OPHN1	O60890	802 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	GCAT	O75600	419 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	PRL	P01236	227 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	KRT14	P02533	472 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	CTPS1	P17812	591 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	SLC8A1	P32418	973 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	GRIA1	P42261	906 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	PAFAH1B1	P43034	410 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	RECQL	P46063	649 aa	Predicted RBP	11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	WNT3A	P56704	352 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	CSTF1	Q05048	431 aa	Known RBP	11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	TRADD	Q15628	312 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	KDM7A	Q6ZMT4	941 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	ARHGEF18	Q6ZSZ5	1173 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	PGBD3	Q8N328	593 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	CCDC89	Q8N998	374 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	LPCAT1	Q8NF37	534 aa		11.38	□□□□□ -0.59
CERS3-208	ENST00000560944	IPMK	Q8NFU5	416 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms