RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 MACC1Q6ZN28 852 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 VPS36Q86VN1 386 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 ZSCAN30Q86W11 494 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 CCNJLQ8IV13 435 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 SLITRK4Q8IW52 837 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 DEFB106AQ8N104 65 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 FSTL5Q8N475 847 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 GPR156Q8NFN8 814 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 OR6C4Q8NGE1 309 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 PMEPA1Q969W9 287 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 VOPP1Q96AW1 172 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 CMKLR1Q99788 373 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 TRIM62Q9BVG3 475 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 EDEM3Q9BZQ6 932 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 B3GNT4Q9C0J1 378 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 SIK2Q9H0K1 926 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 SEMA6CQ9H3T2 930 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 THAP9Q9H5L6 903 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 FAM204AQ9H8W3 233 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 MBNL1Q9NR56 388 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 APPL1Q9UKG1 709 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 GPR34Q9UPC5 381 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 ITM2BQ9Y287 266 aa9.09□□□□□ -0.95
RABGGTA-217ENST00000560521 RP1L1Q8IWN7 2480 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 C16orf96A6NNT2 1141 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 STMND1H3BQB6 276 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 M0QYT0 321 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CETN3O15182 167 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 MTSS1O43312 755 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ZMPSTE24O75844 475 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ALPIP09923 528 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CCL4P13236 92 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CTSEP14091 401 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 LIFP15018 202 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 BLKP51451 505 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CCNHP51946 323 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CDK17Q00537 523 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 CARD16Q5EG05 197 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 DCAF17Q5H9S7 520 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 HID1Q8IV36 788 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ZNF683Q8IZ20 524 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 DCAF4L2Q8NA75 395 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 TP53I13Q8NBR0 393 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 OR7D4Q8NG98 312 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 C9orf43Q8TAL5 461 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 STK32AQ8WU08 396 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ABHD17AQ96GS6 310 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 INTS4Q96HW7 963 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 MED15Q96RN5 788 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 EPAS1Q99814 870 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ANLNQ9NQW6 1124 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 DDIT4Q9NX09 232 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 DAAM1Q9Y4D1 1078 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 ACTL7AQ9Y615 435 aa9.08□□□□□ -0.96
RABGGTA-217ENST00000560521 DOPEY1Q5JWR5 2465 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 I6L893 689 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 NEMP1O14524 444 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 AREL1O15033 823 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 NKX2-8O15522 239 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 MMP20O60882 483 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 CD160O95971 181 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 PNLIPP16233 465 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 GLB1P16278 677 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 ITIH2P19823 946 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 GKP32189 559 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 UGT1A3P35503 534 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SERPINH1P50454 418 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 DNA2P51530 1060 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 MLLT10P55197 1068 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 ARF5P84085 180 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 B4GALNT1Q00973 533 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 DPYDQ12882 1025 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 ALG11Q2TAA5 492 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 ARTNQ5T4W7 220 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 PHF19Q5T6S3 580 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 KCTD16Q68DU8 428 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 OGFOD3Q6PK18 319 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 RRAGAQ7L523 313 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 RD3Q7Z3Z2 195 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SPRED1Q7Z699 444 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SETD3Q86TU7 594 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 GKN2Q86XP6 184 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 PPM1KQ8N3J5 372 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 IL22RA1Q8N6P7 574 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 PCDH20Q8N6Y1 951 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 LMO3Q8TAP4 145 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 FOXD4L4Q8WXT5 416 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SLC35C1Q96A29 364 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 RAB7BQ96AH8 199 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 NT5C1BQ96P26 610 aa9.07□□□□□ -0.96
RABGGTA-217ENST00000560521 SLC2A13Q96QE2 648 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms