RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LHX3Q9UBR4 397 aa14.18□□□□□ -0.14
PKNOX1-209ENST00000560448 SUSD2Q9UGT4 822 aa14.18□□□□□ -0.14
PKNOX1-209ENST00000560448 MBD1Q9UIS9 605 aaPredicted RBP14.18□□□□□ -0.14
PKNOX1-209ENST00000560448 SNX12Q9UMY4 172 aa14.18□□□□□ -0.14
PKNOX1-209ENST00000560448 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
PKNOX1-209ENST00000560448 A0A1W2PP55 124 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 APOC4-APOC2K7ER74 178 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 KPNA3O00505 521 aaPredicted RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 PLRG1O43660 514 aaKnown RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 CST8O60676 142 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 SEMA4FO95754 770 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 PEX11BO96011 259 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 APOC2P02655 101 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 CTSLP07711 333 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 NFKBIAP25963 317 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 DRD3P35462 400 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 MMP13P45452 471 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 NEK3P51956 506 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 GBE1Q04446 702 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 SRSF5Q13243 272 aaKnown RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 XRCC4Q13426 336 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 ZNF805Q5CZA5 627 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 ARSIQ5FYB1 569 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 PEAR1Q5VY43 1037 aaPredicted RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 LYSMD4Q5XG99 296 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 ERN2Q76MJ5 926 aaKnown RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 CCDC13Q8IYE1 715 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 AADATQ8N5Z0 425 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 TTC13Q8NBP0 860 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 NCDNQ9UBB6 729 aa14.17□□□□□ -0.14
PKNOX1-209ENST00000560448 METTL12A8MUP2 240 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 HACD1B0YJ81 288 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 KRIT1O00522 736 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 AP1G1O43747 822 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 SOCS5O75159 536 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 NEBLO76041 1014 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 BCKDHBP21953 392 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 SERPINA4P29622 427 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 ADPRHP54922 357 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 SLC10A7Q0GE19 358 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 MEI1Q5TIA1 1274 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 ALG1LQ6GMV1 187 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 BRAT1Q6PJG6 821 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 GDPD4Q6W3E5 623 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 ARHGAP36Q6ZRI8 547 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 TSEN2Q8NCE0 465 aaKnown RBP14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 CHST14Q8NCH0 376 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 CCNYQ8ND76 341 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 CEP76Q8TAP6 659 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 GRIN3AQ8TCU5 1115 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 DNASE2BQ8WZ79 361 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 UBXN4Q92575 508 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 NUDCD1Q96RS6 583 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 VAT1Q99536 393 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 GPR174Q9BXC1 333 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 OSBPL8Q9BZF1 889 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 POLR1EQ9GZS1 481 aaKnown RBP14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 NEUROG2Q9H2A3 272 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 ZDHHC6Q9H6R6 413 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 SARDHQ9UL12 918 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 HEY1Q9Y5J3 304 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 ACTL7AQ9Y615 435 aa14.16□□□□□ -0.14
PKNOX1-209ENST00000560448 BCLAF3A2AJT9 711 aaKnown RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 GFRA3O60609 400 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CCNB1P14635 433 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 GNSP15586 552 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 ACSL1P33121 698 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CCR5P51681 352 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 POLR2LP62875 67 aaKnown RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 IFI35P80217 286 aaPredicted RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 AGBL4Q5VU57 503 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 FBXL19Q6PCT2 694 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 ZNF572Q7Z3I7 529 aaPredicted RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CYP2U1Q7Z449 544 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 SYT12Q8IV01 421 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 TP53INP2Q8IXH6 220 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 ALG3Q92685 438 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 HAUS1Q96CS2 278 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 ERLEC1Q96DZ1 483 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CARD9Q9H257 536 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 VPS45Q9NRW7 570 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 THADAQ6YHU6 1953 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 TSPAN11A1L157 253 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 MEI4A8MW99 385 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 C10orf142B7Z368 130 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 DDX3YO15523 660 aaKnown RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 FTCDO95954 541 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 ADRB3P13945 408 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 TCP1P17987 556 aaKnown RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CR2P20023 1033 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 CA4P22748 312 aa14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 DHPSP49366 369 aaPredicted RBP14.15□□□□□ -0.14
PKNOX1-209ENST00000560448 TUBB4BP68371 445 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms