RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 ARID1BQ8NFD5 2236 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SSU72P8A0A1W2PR75 194 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 ARHGAP42A6NI28 874 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 MYO1FO00160 1098 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TLR4O00206 839 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 AKR1B10O60218 316 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 CBFA2T3O75081 653 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 PIGNO95427 931 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 IGSF6O95976 241 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 H2AFZP0C0S5 128 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF883P0CG24 379 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SPINK2P20155 84 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 IL4RP24394 825 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 GJC1P36383 396 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 NXPH1P58417 271 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TAS2R40P59535 323 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 MMRN1Q13201 1228 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SETMARQ53H47 684 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 NEK5Q6P3R8 708 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 GDPD4Q6W3E5 623 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 KDM7AQ6ZMT4 941 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 DBX2Q6ZNG2 339 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 H2AFVQ71UI9 128 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 MFSD2AQ8NA29 543 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TMEM145Q8NBT3 493 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TSEN2Q8NCE0 465 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 SETD7Q8WTS6 366 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TEKT4Q8WW24 435 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 CASKIN2Q8WXE0 1202 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 CTNNBL1Q8WYA6 563 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 LRIG1Q96JA1 1093 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 NSMCE3Q96MG7 304 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TRIM5Q9C035 493 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 DEF6Q9H4E7 631 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 NHEJ1Q9H9Q4 299 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 KLHL11Q9NVR0 708 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 PCOLCE2Q9UKZ9 415 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TPX2Q9ULW0 747 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 DMTF1Q9Y222 760 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
RABGGTA-216ENST00000560243 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 IGLON5A6NGN9 336 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 TMEM110-MUSTN1A8MSY1 372 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 PRAMEF26H0Y7S4 382 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 MUSKO15146 869 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 RAD51BO15315 384 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 BUB1BO60566 1050 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 PROSCO94903 275 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 TPM1P09493 284 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 TIMP2P16035 220 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 ARL4AP40617 200 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 ARSEP51690 589 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 CLDN2P57739 230 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 CCDC15Q0P6D6 951 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 FOXC1Q12948 553 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 TRIP6Q15654 476 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 GATAD2AQ86YP4 633 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 ELF4Q99607 663 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 SP110Q9HB58 689 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 DONSONQ9NYP3 566 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 UVRAGQ9P2Y5 699 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 IPO11Q9UI26 975 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 LRRK1Q38SD2 2015 aa11.8□□□□□ -0.52
RABGGTA-216ENST00000560243 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TTC24A2A3L6 582 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 AKR1B15C9JRZ8 316 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 AREL1O15033 823 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 AP1G1O43747 822 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 PALMO75781 387 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 PEX11BO96011 259 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 PAK4O96013 591 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TMEM253P0C7T8 217 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 NUDT1P36639 197 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CCT8P50990 548 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF135P52742 658 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CDH6P55285 790 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 RPS21P63220 83 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 IL10RBQ08334 325 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC10A7Q0GE19 358 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 KRT81Q14533 505 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 STAT4Q14765 748 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 GCNT7Q6ZNI0 430 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TTC7BQ86TV6 843 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 ZSWIM9Q86XI8 627 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 CAMK1DQ8IU85 385 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 TC2NQ8N9U0 490 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 OR13H1Q8NG92 308 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 BAHD1Q8TBE0 780 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC35G2Q8TBE7 412 aa11.79□□□□□ -0.52
RABGGTA-216ENST00000560243 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms